| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0562 |
|---|
| Symbol | |
|---|
| ID | 3747509 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 665033 |
|---|
| End bp | 666031 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637773096 |
|---|
| Product | putative PAS/PAC sensor protein |
|---|
| Protein accession | YP_378878 |
|---|
| Protein GI | 78188540 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAGA ATACGCCACT TTCCAACGAC TTAGCTCTTT TACGCGCTCA AGCTGAAGAG
CTGCTGACGA AAGGGCAGCA ACAGCTCTCC GATCCCTCTA TTTCACCCGG TGATATGCAG
CGAATTCTGC ATGAATTAGC GGTACATCAA ATTGAGTTAG AAATGCAACA AGAACAACTG
TTGCAAGCAC GCGTTGAGTT AGAAGAGAGC ATTGAGTGCT ATACCGAACT CTACGATTTT
GCTCCGCTTG GCTATGTAAC CTTGAGCCGC AATGGAACCA TACAACAAGT TAATTTAACA
GCAACAAAAT TATTAGGCAT TGAGCGTTCT CGATTGGTAG GCGATTATTT TGGGCGCTTG
ATAGTAGCGG AAGATATAAA GGCATTTCAA GCCATGCTTG AACAAGTTTT TGTGCAGCAA
AAGCACACCT CATGCGAAGT AAAGCTCTTT AACACCCGTC AGCAATCCAC CTCTCCGCTG
TTGCCCTCGC CAGCCCACAA CGAAACATTG CCCCACACCA TTCGTATTGA TGCCGTGCTA
AGCACTGATG GTGAAGAGTG CAGCGTTGTG GTGTCGGACA TTAGTATGCA AAAACAAATT
GAGCGCGAAA ATCAAGCTTT GAAAGAGCAA CTCAATCAAA CATTACTCCC TGAGCTTACA
CCAAATGAAA TCACTAACAG TGAGATTGAT GACAACAATG CCGCCGATTT TAATCATGCC
TTACTCGACA AAGTAATTCA TTCACGCATT CGCTTTGCCA TACTCTCCTA TCTCAGTACG
GCAGGCAAAG CCTCATTTGT TACCATAAAA CGGCAGATAA ATACCACCGA TGGCAACTTA
AGCGTTCATT TACGAATGCT TGAATCCGCC GCTTATGTGA GTTCCGACCG CGAAATAAAT
GAGAACAAAA TGCAAACAAC ACTATACACC ATTACTGAAG CGGGTAACCA TGCCTTGCAA
GCCTATAAAC GGCAACTCCG TGCATTTCTT GGGCTGTAA
|
|---|
| Protein sequence | MIKNTPLSND LALLRAQAEE LLTKGQQQLS DPSISPGDMQ RILHELAVHQ IELEMQQEQL
LQARVELEES IECYTELYDF APLGYVTLSR NGTIQQVNLT ATKLLGIERS RLVGDYFGRL
IVAEDIKAFQ AMLEQVFVQQ KHTSCEVKLF NTRQQSTSPL LPSPAHNETL PHTIRIDAVL
STDGEECSVV VSDISMQKQI ERENQALKEQ LNQTLLPELT PNEITNSEID DNNAADFNHA
LLDKVIHSRI RFAILSYLST AGKASFVTIK RQINTTDGNL SVHLRMLESA AYVSSDREIN
ENKMQTTLYT ITEAGNHALQ AYKRQLRAFL GL
|
|---|
| |