| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0548 |
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| Symbol | |
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| ID | 3747052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 652586 |
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| End bp | 654568 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637773082 |
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| Product | DNA primase |
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| Protein accession | YP_378864 |
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| Protein GI | 78188526 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00859761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATGA TTCCGCCCGC AATTATTGAT GAGGTTCGCC AAGCTGCCGA CATTGTTGAT
GTTGTTTCGG ATTATGTTGC CCTGCAACCT TCGGGGCGTA ACTATAAAGC CCTTTCTCCC
TTTACGCAAG AAAAAACTCC CTCCTTTATT GTTTCCCCCG ATAAGCAAAT TTACAAGTGC
TTTTCAACGG GCAAAGCGGG CAATGTTTTT TCTTTTATTA TGGAGATGGA AAAAGTCCCC
TTTATGGAGG CGCTGAAGTT AGTAGCGCAA CGGGCGGGGA TTGATATTAG CCGCTATACG
GAGCCAAAAG GAAAGCAGGA AGGAGAGGAG GAGCAAGGAA GTGGGGCGGC TTTGCGTTGG
GCAGCTCGCA TGTTTCATAG TTTGCTGAAG CAACCCGCTG GTGCTGAAGG ATGGCGTTAT
TTTGTGGAAG AGCGGGGATT GCGGGAGGAA ACCATCAACC GTTTTGGTTT GGGCTATGCG
CCTGAAAGCT GGGATTTTTT ATTGCGTGAA GCAAGGCGCG AGGGTATTAA GAGCGAGCAG
TTGGTTGAAC TTGGGTTGCT TGTTAGCCAT CGCGAAAAAC AGTCGCTGTA TGACAGCTTT
CGCCACCGAG TAATATTCCC CATATTTTCA CGCGGTGGGC AGGTGGTTGG CTTCGGTGGT
CGGGCGTTAG TAAGCGATGA GCGTTCGCCG AAGTACCTCA ATTCGCCCGA AAGCGCCATG
TTTGCAAAGT CGAAGCTCCT CTATGGCTTA CATTTTGCAA AAAATGAAAT TCGCCGCCAA
GAGCGCGCTA TTCTTGTAGA AGGGTATATG GATGTTTTAG CGCTGCATCA AGCAGGGCTT
ACCAATGCCG TTGCCTCGTG CGGTACAGCG CTGACGCGCT ATCAAGCAAA AATGTTGCGC
CACTATAGCG AGCATGTGCT CTTTGTTTAT GATGCCGATA AAGCAGGGCA GAAGTCTATG
ATGAGCGGCA TTGATATTCT TGTGAGCGAG CAAATGGTGC CTCAAGTGCT TATGCTGCCC
GAAGGCGACG ACCCCGATAG CTTTGTGCGG CGCGAAGGAC GACAGGGATT TTTGCAATAC
GCCGAAAGCC ACACTATGGG CTTTCAAGAT TTTCAGCTTG CTTTTTTTGA AGCCGCAGGA
GCATTTTCTA CCCCTGAGCA AAAAGCTGAA GCGCTTCGAG TGATGGTACG AACCATTGCG
CTCATCCCTA AACGTGCGCA ACGGGAATTG TATGCGCAAG AGCTTTCAAA AAAAGTAGGG
TTAACCGTTA CAGCACTTCG AGAGTTGTTG GGAAATGCTA CCAGCGCTGT TGCCAAGCAA
CAATCGTGCA CGCCGAGCAA AGCCTCCGCA ACAGCACCCA CATCCTCGTC CGCCACAAAT
GCTACAAGCG CTCCAACTAT TCCACATGCT CCCAATCTCC CTAATGCCCA AGCGCTGCCA
CCACTCTCCG TGCTTGAAAA AACCTTTCTT AAAGCTCTGC TTGAAAGCAC GCAATATGGT
ACTGCCGTAC TGGGTTTTGC AGCCTCGCAT CAAAGTATGT TAGAGCTTCG TCATCCCTTA
GCGCAAGAAA TTTTTGCTCA CCTTATCCAC CGCTACCACA ACATAGCCGC CGACCCAGAA
GCCACTATTG ATATGGTTTC TGAAATTAGC GCATTCACCA ACCCCGAAAC ACGCGATCTT
GCCTCTACCC TTTTGCTTGA TCCTCCCATT AGCCCCAAAT GGCAACAACA AAACGATCTG
TTTAGTGAAC AAGCACGCCG CTGTCTTGCT ATGTTTCTTG ACGCATTTAA GAATTTAGTG
TTGGAGCCAT TGCTTGACGA AAAAAACAAG CTTATGGAGC AAATTCGTGT TGAGGAAAAT
GTGGAGCGTG AAATTGAGCT ATCGAGGCAA AAAATTGTGC TCGATAAAAA AATTCGTGAA
GAGAACCGCA GCTTACAGCA AATGATTAAG GCAATTCTTG ATTCAACGCA GCAGGTTGGG
TAG
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| Protein sequence | MSMIPPAIID EVRQAADIVD VVSDYVALQP SGRNYKALSP FTQEKTPSFI VSPDKQIYKC
FSTGKAGNVF SFIMEMEKVP FMEALKLVAQ RAGIDISRYT EPKGKQEGEE EQGSGAALRW
AARMFHSLLK QPAGAEGWRY FVEERGLREE TINRFGLGYA PESWDFLLRE ARREGIKSEQ
LVELGLLVSH REKQSLYDSF RHRVIFPIFS RGGQVVGFGG RALVSDERSP KYLNSPESAM
FAKSKLLYGL HFAKNEIRRQ ERAILVEGYM DVLALHQAGL TNAVASCGTA LTRYQAKMLR
HYSEHVLFVY DADKAGQKSM MSGIDILVSE QMVPQVLMLP EGDDPDSFVR REGRQGFLQY
AESHTMGFQD FQLAFFEAAG AFSTPEQKAE ALRVMVRTIA LIPKRAQREL YAQELSKKVG
LTVTALRELL GNATSAVAKQ QSCTPSKASA TAPTSSSATN ATSAPTIPHA PNLPNAQALP
PLSVLEKTFL KALLESTQYG TAVLGFAASH QSMLELRHPL AQEIFAHLIH RYHNIAADPE
ATIDMVSEIS AFTNPETRDL ASTLLLDPPI SPKWQQQNDL FSEQARRCLA MFLDAFKNLV
LEPLLDEKNK LMEQIRVEEN VEREIELSRQ KIVLDKKIRE ENRSLQQMIK AILDSTQQVG
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