| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0542 |
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| Symbol | |
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| ID | 3747046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 646079 |
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| End bp | 646834 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637773076 |
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| Product | pseudouridine synthase, Rsu |
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| Protein accession | YP_378858 |
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| Protein GI | 78188520 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATATGA AGCAGGAAAA GAGTAATAAC GATGGCATGA GAATTAACCG CTTTCTTGCC
ATGTGCGGCA TTGCCTCGCG CCGAGCGGCT GACCAATTGG TACAGGAGGG GCGAGTTTGT
ATTAATGGCA AAATTGTTAC CACACCGGGT GTAAAGGTTA ACCCATCGCG TGATGAAGTA
ATTATAGATG GTAAACGCTT TGCACAACCT GAAAATCGCA AAGTCTATAT ACTTCTCAAC
AAACCCCGCA ACGTTATTAC CACAAGCAGC GATGAGCGGC AGCGCGAAAT GGTGCTCGAT
TTTATTGATG TGCCTGAGCG TATTTTTCCC GTTGGGCGCC TTGATCGAAA AACTACAGGC
GTTATACTGC TCACCAATGA TGGCGAATTA GCACATAAAT TAATGCATCC TTCGTCGGGA
GTGAAAAAAG AGTATATTGC GGAGCTTAGT GAGCGTTTTC CTGCTGCAAT GTTAGGCAAA
CTTACCAATG GTATGCGCCT AAAAGATACG GGAGAAAAGG TAAGCCCCTG CCGCGCCAAG
CTGCTTGATG ATGGTATGCG AGTGCTTTTA AGCATTCATG AAGGTAAAAA TCATCAAGTG
CGCCGCATGT TCGATACGCT GGGTTTTGAG GTCAAGCGCC TTGACCGCGT AGCCTATGCG
GGGTTGCAAG CGGGCGAATT GCGCCGTGGG GAGTGGCGCT ACCTAAGCCG TAACGAAGTA
CGGGAACTTT ACCGCATATC GCAAGAGGAG GCGTAA
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| Protein sequence | MYMKQEKSNN DGMRINRFLA MCGIASRRAA DQLVQEGRVC INGKIVTTPG VKVNPSRDEV
IIDGKRFAQP ENRKVYILLN KPRNVITTSS DERQREMVLD FIDVPERIFP VGRLDRKTTG
VILLTNDGEL AHKLMHPSSG VKKEYIAELS ERFPAAMLGK LTNGMRLKDT GEKVSPCRAK
LLDDGMRVLL SIHEGKNHQV RRMFDTLGFE VKRLDRVAYA GLQAGELRRG EWRYLSRNEV
RELYRISQEE A
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