Gene Cag_0539 details

Gene Information

• Locus tag: Cag_0539
• Symbol: hisH
• ID: 3746349
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: +
• Start bp: 643445
• End bp: 644050
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637773073
• Product: imidazole glycerol phosphate synthase subunit HisH
• Protein accession: YP_378855
• Protein GI: 78188517
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0118] Glutamine amidotransferase
• TIGRFAM ID: [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit

Plasmid Coverage information

• Num covering plasmid clones: 48
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTATTTA TTGCTGACTA TGGAGCGGGA AATCTCCGCT CGGTACTTAA AGCATTTGAG 
TTTCTTGGAA TCAAAGCCAT TGTGAGCAAT GATCCTCGCA AAATGGCAGG TTACCGTAAG 
GTGCTGCTAC CGGGCGTTGG TGCCTTTGGG CAAGCAATGC AATCGCTTGA AGCATTAGGC 
TTTGTTTCGG CGCTGTTGGA GCATGTTGAT AAAGGTGGGC ATTTGCTTGG CATTTGCTTA 
GGCATGCAGT TGCTTTTAAG CGAAAGCGAA GAGATGGGCA CTCACAAAGG GTTGAATTTA 
GTGCCCGGTA AGGTAAAGCA CTTTGTAAGC AGCAGCGATA AAATTCCTCA AATTGGATGG 
AATGCTGTTG ATTTTAGTAA GCAAAGCGAC CTTTTCCGCA ATGTGGCAGA CCACTCATTT 
TTTTACTTTG TGCACTCCTA TTATTGCGAA ACTGAATCAG TTGAAGCCGT TGCGGCTACC 
ACCCTTTTTG CTGGGCAAAA TTTTTGTTCC GCCATTGAAA AAAATGGTAT TTTTGCCGTC 
CAGTTTCATC CCGAAAAAAG CGCTGATGCG GGGTTGAAGG TGTTAGCGAA CTTTGCTGAG 
CTGTAA 

 

Protein sequence

MVFIADYGAG NLRSVLKAFE FLGIKAIVSN DPRKMAGYRK VLLPGVGAFG QAMQSLEALG 
FVSALLEHVD KGGHLLGICL GMQLLLSESE EMGTHKGLNL VPGKVKHFVS SSDKIPQIGW 
NAVDFSKQSD LFRNVADHSF FYFVHSYYCE TESVEAVAAT TLFAGQNFCS AIEKNGIFAV 
QFHPEKSADA GLKVLANFAE L