| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0483 |
|---|
| Symbol | |
|---|
| ID | 3746352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 562564 |
|---|
| End bp | 563259 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637773017 |
|---|
| Product | putative deoxyribonucleotide triphosphate pyrophosphatase |
|---|
| Protein accession | YP_378799 |
|---|
| Protein GI | 78188461 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0398572 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATA CCATCACCAT TATTTTAGCA ACGGGTAACC GCGATAAAGT AAAAGAGTTA
CGTCCTTTGC TGGAGCACAT TTCGCCTATC ATAACCGTTG TTACGCTGCC TGAGCTTGGC
GTAAGCGTTG ATGTTGAAGA GACTGAGGAG ACACTTGAAG GTAATGCCCT CTTAAAAGCT
CGAGCTATTT TTAGCATTCT TGAGAATCGT TTTCCCTTTC TTATTGCCCT TGCTGACGAC
ACTGGGCTTG AGGTTGCGGC GCTTGATGGG GCGCCCGGTG TTTACTCGGC ACGCTATGCC
CCAACGGCTG ATGGCACGGC TCCCACCTAT AGCGATAATG TGAATCATCT CCTTAAAAAT
ATGGCGGGAA AAGAGGAGAG GAGCGCCTGC TTCCGAAGCC TTATTGCTTT AAAGGGGCGA
ATCCCTACGG GTGATAGCAA GGCGTTTGCC TTTGAACAAA CGGCTGCGGG TGAAGTGCAT
GGCTCCATTA CACGAGAGCC TTTTGGTGAT GGCGGTTTTG GCTACGATCC CGTGTTTTAT
GTTGAAGCCA CAGCTAAAAC CTACGCTCAA ATGAGCATTG CTGAAAAAAA TAGCATGAGC
CACCGCGCCC GTGCCGTACA GCAAGCAATT GCCGACTTAC GCACGCTTTT TGCGGAACAC
CACCTTCAAC TCACCCCAAG CACGGAGCAA ACATGA
|
|---|
| Protein sequence | MTDTITIILA TGNRDKVKEL RPLLEHISPI ITVVTLPELG VSVDVEETEE TLEGNALLKA
RAIFSILENR FPFLIALADD TGLEVAALDG APGVYSARYA PTADGTAPTY SDNVNHLLKN
MAGKEERSAC FRSLIALKGR IPTGDSKAFA FEQTAAGEVH GSITREPFGD GGFGYDPVFY
VEATAKTYAQ MSIAEKNSMS HRARAVQQAI ADLRTLFAEH HLQLTPSTEQ T
|
|---|
| |