Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0453 |
Symbol | |
ID | 3747378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 531318 |
End bp | 533162 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637772986 |
Product | ATPase |
Protein accession | YP_378769 |
Protein GI | 78188431 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAGGCA TGGGGCAGAT GGGTGGTGGA GGCGGCGGTG GCTTTAGAAC ACAGCAAGAC GACACGCTTT CAAAAGGGAA AAAAAAGTCG CTTGACGGCT ACATTATTTC GCGCTTATTG CAATACGTAA AGCCGTACCG CAACCTTGTT TATATTGCCG TAGCGCTCAC CATTGCAGGT TCGTTTCTTG GACCGTTGCG CCCATACCTC ACCAAAATTG CAATTGACGA CCACATTTCA AACGGGGATT TGCATGGTTT GGGCGTTATT AGCGCCCTCT TAGCAGGTAC CATTGTGCTT GATGGAGTGA AGCAGTACAT CACCACATGG ATGACCCAAA TTATTGGGCA AAAAGCGGTG CTCGATATTC GCATGGATAT TTTTAGCCAT CTGCAAAAAC TCCCTACCCG CTTTTACGAC CGCAATCCCG TAGGGCGACT TATTACTCGC ACAACGGGTG ATGTTGAAGC GCTCAACGAA ATGCTCTCAA GCGGCATTAT TACCATTCTC GGCGACTTAT TGCAGATCTT TTTTATTGTG GGATTAATGG TGTGGATTGA TTGGAAGCTC ACCTTGTGCG TGCTTGCAAT TTTACCGCTC ATGATTTACG CCACCATCTT TTTCAAACAG CGTGTACGGC AGGCTTTTCA AGATGTTCAA ACGCACATTG CACGGCTTAA CACCTTTTTT CAAGAGCATT TAACCGGCAT GAACATTGTG CAGCTCTTTA ACCGCGAAGA GCGCGAAGCT GCCCGTTACG CCGCCATTAA TGCCGACCAC CGCGATGCCA ACATTCGCAC CGTCTTTTAC TTCTCAATTT ACTTTCCCCT CATTGAAATG CTCAGCTCGC TTGCCGCAGG CATCGTGCTG TGGTACAGTG CGGTACGCAT TATGCAGGCA GATATATCGC TTGGTGTGGT AGTGTCGTTT GTGCAATACA TTTGGCTCTT TTTCCGCCCG TTGCAGCACC TTTCCGACCG TTTTAATGTT ATTCAAAGCG CTATTGCCAG CTCCGACCGC ATTATTCGTT TATTAGATGA AAAAGAGGCA ACCGACCCCA CTGCCATCGA AAAAGATCTT GATGCCTTTC GCAATCGCAT TGAATTCCAA AACGTATGGT TTGCATATGA TGATGAAAAT TGGATTCTCA AAGATCTTTC TTTCACCATC AATCACGGCG AAAAAATTGC CATTGTAGGA GCAACCGGCA GCGGCAAAAC CACAATGATT AACATTCTCT CACGCCTGTA CCCTTACGCC AAAGGGAGCG TAACCATTGA TGGCACTCCT TTGCAAGATA TTTCGGAACG CTCCATTCGC AATTTGGTAG GCGTTGTTAT GCAGGATGTC TTTCTGTTTT CGGGCACCAT TCGCGAAAAC TTAGCCTTTG GCAACCCCAA CGTTACTGAC GAAGAGCTAC GCAAAGCGGC ACGCATTGTA GGGGCTGATC GCTTTATTGA GCAATTGCCG GGTGGATATA ACTATAAACT GTTAGAAAAT GGCACGGGTT TATCATCGGG GCAAAAGCAG CTTATTGCCT TTGTACGCGC CCTGCTCTAC AACCCCTCCA TTTTAGTGCT TGACGAAGCC ACCAGCTCGG TTGATACCGA AACGGAGCAA TTGATTGATG CCGCCACCAA CCGCTTAATG CAAGAACGCA CCTCCATTAT TATTGCCCAC CGCCTCTCCA CCGTGCAAAA AGCTGATCGC ATTATTGTGC TGCACAAAGG CGTTATTCGC GAAATTGGTT CTCATCAAGA GCTGCTTGCA CAACGAGGGC TTTACTACAA ATTGTATTTG CTACAGCATC CTGAGCAGAC GTTAAAGACG GAAGCAAAGG GTTAA
|
Protein sequence | MRGMGQMGGG GGGGFRTQQD DTLSKGKKKS LDGYIISRLL QYVKPYRNLV YIAVALTIAG SFLGPLRPYL TKIAIDDHIS NGDLHGLGVI SALLAGTIVL DGVKQYITTW MTQIIGQKAV LDIRMDIFSH LQKLPTRFYD RNPVGRLITR TTGDVEALNE MLSSGIITIL GDLLQIFFIV GLMVWIDWKL TLCVLAILPL MIYATIFFKQ RVRQAFQDVQ THIARLNTFF QEHLTGMNIV QLFNREEREA ARYAAINADH RDANIRTVFY FSIYFPLIEM LSSLAAGIVL WYSAVRIMQA DISLGVVVSF VQYIWLFFRP LQHLSDRFNV IQSAIASSDR IIRLLDEKEA TDPTAIEKDL DAFRNRIEFQ NVWFAYDDEN WILKDLSFTI NHGEKIAIVG ATGSGKTTMI NILSRLYPYA KGSVTIDGTP LQDISERSIR NLVGVVMQDV FLFSGTIREN LAFGNPNVTD EELRKAARIV GADRFIEQLP GGYNYKLLEN GTGLSSGQKQ LIAFVRALLY NPSILVLDEA TSSVDTETEQ LIDAATNRLM QERTSIIIAH RLSTVQKADR IIVLHKGVIR EIGSHQELLA QRGLYYKLYL LQHPEQTLKT EAKG
|
| |