Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0397 |
Symbol | |
ID | 3747565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 462279 |
End bp | 462707 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637772925 |
Product | protein tyrosine phosphatase |
Protein accession | YP_378713 |
Protein GI | 78188375 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | [TIGR02691] arsenate reductase (thioredoxin) |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.14 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCACCT CCATTCTCAT TCTCTGTACC AGCAACTCCT GCCGAAGCCA AATGGCTGAA GGATTTCTCC GTTCATTCAA CAAATCACTT GAGGTCTATT CCGCAGGCAC CAAACCAACC GAAGCAGTGC ATCCACTTGC CATAAAAGTG ATGCACGAAG AGTGGATTGA TTTAAGCCGC AACAAGCCAA AAAGCGTGGA TGAATTTCTT AACAAGCCAT TCGATTACGT TATCACCGTA TGCGATGGCG CAAAAGAATC ATGCCCTATA TTTAGCGGGC AAGTAAAGCA TCGCCTCCAC ATCAGTTTTG ACGATCCCGC CGAAGCCATC GGCACACAAG CCGAGCAACT TGCCGTTTTT CGCCGCGTGC GCGATGACAT CAATCAACGC TTTCGGCAGT TCTATAACGA ACATATATCA GGGAAGTAG
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Protein sequence | MLTSILILCT SNSCRSQMAE GFLRSFNKSL EVYSAGTKPT EAVHPLAIKV MHEEWIDLSR NKPKSVDEFL NKPFDYVITV CDGAKESCPI FSGQVKHRLH ISFDDPAEAI GTQAEQLAVF RRVRDDINQR FRQFYNEHIS GK
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