Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0277 |
Symbol | |
ID | 3748160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 304949 |
End bp | 305764 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637772803 |
Product | Sel1 repeat-containing protein |
Protein accession | YP_378596 |
Protein GI | 78188258 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAGAA AATTTTTCAC TTCAATTCTT TGCTTACTAC TTTTTAGTGG AACTGTACAT GCCGAATCAC CTCAAGAAAT TCAACAATTA CGAATTGCGG CTGAACAAGG CAATGCAGCG GCTCAGTTTA ATTTGGGCAT AAAATATCAA TTTGGAAAAG GTGTAAGACA GGATTATGTC GAAGTAATTA AATGGTTTCG TCTTGCAGCT GAACAAAATC ATGTCTATGC TCAATTAATG CTGGGAACAA TGTATAGAAA TGGTGAAGGA GTGAGACAAG ATTATATCGA GGCAATAAAA TGGTTTCGTC TTGCAGCTGA ACAACGATAT GCTGATTCTC AATATTCACT TGGGTTGATG TATGCTGGTG GTAAAGGTGT TTCAAAAGAT TATGTTGAAG CAATAAAATG GTTTCGCTTA GCTGCTGAAC AAGGAAATGT TGAAGCTCAA GCTATGCTGG GATCAATATT TTATGTTGGT AAAAACGTTC AACGGGATGA ATTCGAAGCG ATAAAGTGGT TTAAGCTAGC TGCTCAACAA AATTATGCTT ATGCACAAAT GATGCTTGGC ACGATGTATG CTACAGGTGA AGGTGTAAGA CAAGATTATG TTGAAGCGAT AAAATGGTAT CGTTTTGCTG CTGAACAAGG AAATGTTGAA GCTCAATATG ATCTTGGTTT ATTATATTTA AATGGTTATG GAGTAAGACA AAACAAAGCT ATAGCAAAAG AATGGTTTGG CAAGGCATGT GATAGTGGTT CACAAGAAGG TTGCAATCAA TATCGCGCAT TAAATATACC ACAAAAACAT CGATAA
|
Protein sequence | MKRKFFTSIL CLLLFSGTVH AESPQEIQQL RIAAEQGNAA AQFNLGIKYQ FGKGVRQDYV EVIKWFRLAA EQNHVYAQLM LGTMYRNGEG VRQDYIEAIK WFRLAAEQRY ADSQYSLGLM YAGGKGVSKD YVEAIKWFRL AAEQGNVEAQ AMLGSIFYVG KNVQRDEFEA IKWFKLAAQQ NYAYAQMMLG TMYATGEGVR QDYVEAIKWY RFAAEQGNVE AQYDLGLLYL NGYGVRQNKA IAKEWFGKAC DSGSQEGCNQ YRALNIPQKH R
|
| |