Gene Cag_0277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_0277 
Symbol 
ID3748160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp304949 
End bp305764 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content36% 
IMG OID637772803 
ProductSel1 repeat-containing protein 
Protein accessionYP_378596 
Protein GI78188258 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAA AATTTTTCAC TTCAATTCTT TGCTTACTAC TTTTTAGTGG AACTGTACAT 
GCCGAATCAC CTCAAGAAAT TCAACAATTA CGAATTGCGG CTGAACAAGG CAATGCAGCG
GCTCAGTTTA ATTTGGGCAT AAAATATCAA TTTGGAAAAG GTGTAAGACA GGATTATGTC
GAAGTAATTA AATGGTTTCG TCTTGCAGCT GAACAAAATC ATGTCTATGC TCAATTAATG
CTGGGAACAA TGTATAGAAA TGGTGAAGGA GTGAGACAAG ATTATATCGA GGCAATAAAA
TGGTTTCGTC TTGCAGCTGA ACAACGATAT GCTGATTCTC AATATTCACT TGGGTTGATG
TATGCTGGTG GTAAAGGTGT TTCAAAAGAT TATGTTGAAG CAATAAAATG GTTTCGCTTA
GCTGCTGAAC AAGGAAATGT TGAAGCTCAA GCTATGCTGG GATCAATATT TTATGTTGGT
AAAAACGTTC AACGGGATGA ATTCGAAGCG ATAAAGTGGT TTAAGCTAGC TGCTCAACAA
AATTATGCTT ATGCACAAAT GATGCTTGGC ACGATGTATG CTACAGGTGA AGGTGTAAGA
CAAGATTATG TTGAAGCGAT AAAATGGTAT CGTTTTGCTG CTGAACAAGG AAATGTTGAA
GCTCAATATG ATCTTGGTTT ATTATATTTA AATGGTTATG GAGTAAGACA AAACAAAGCT
ATAGCAAAAG AATGGTTTGG CAAGGCATGT GATAGTGGTT CACAAGAAGG TTGCAATCAA
TATCGCGCAT TAAATATACC ACAAAAACAT CGATAA
 
Protein sequence
MKRKFFTSIL CLLLFSGTVH AESPQEIQQL RIAAEQGNAA AQFNLGIKYQ FGKGVRQDYV 
EVIKWFRLAA EQNHVYAQLM LGTMYRNGEG VRQDYIEAIK WFRLAAEQRY ADSQYSLGLM
YAGGKGVSKD YVEAIKWFRL AAEQGNVEAQ AMLGSIFYVG KNVQRDEFEA IKWFKLAAQQ
NYAYAQMMLG TMYATGEGVR QDYVEAIKWY RFAAEQGNVE AQYDLGLLYL NGYGVRQNKA
IAKEWFGKAC DSGSQEGCNQ YRALNIPQKH R