| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0197 |
|---|
| Symbol | |
|---|
| ID | 3746684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 224255 |
|---|
| End bp | 226897 |
|---|
| Gene Length | 2643 bp |
|---|
| Protein Length | 880 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637772724 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_378518 |
|---|
| Protein GI | 78188180 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.267053 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACACC CACCATTTCA CCGCTTGATT GCTTTTTTGC TTTTTCTTGG AGCTGAAGTG
CTTTATTTGG CAACAATGGC TCCAACCTTT TCCTTTTGGG ATTGTGGTGA ATTTATTGCT
ACAGCCGTAA CGCTTGGCAT TCCTCATCCC CCCGGTGCGC CACTTTACCT TTTGCTTGGG
CGTTTGTTCG CCATGATTCC CTTTGTGAGC GACATTGGTG CACGGGTGAA TGTGATTAGT
ACGCTTGCAA GTTCGGCAAC GGTGATGCTT ACCTATCTTA TTACGGTTCG TTTTATAACG
CTCTACCGTA AACATCCCAT AAACGAGTGG AGCCGTAGTG AGCAAATTGC GGCGTATGGG
GGCGCAGCCG TGGGGGCGTT AGCACTCGCT TTTTCCGATA GCTTTTGGTT TAATGCGGTA
GAGGCTGAGG TTTATGCGTT ATCGTCGCTT TTTACGGCGC TTGTGGTGTG GTTGATGTTG
CGTTGGCATG AGGAGGCTCC AAAAGCGGGC AATGAGCGGT GGCTTTTGTT GGTGATGTAC
ATTATTGGGC TCTCTATTGG CGTTCATCTT TTAAGTTTGC TTGCCGTGTT TGCGGTTGCG
TTAGCTTACT ATTTTAAAAA GCATCAGGTA ACGCTTGTAA GTTTTGGGTG GCTTGTGGTG
GTCTCTTTGG CGCTCTTTTT CTTGATCTAC GTAGTTATTA TTAAAGGGTT GCCGGTGCTT
TTTCAGGTGG CTTCGTGGTG GGGTTTGCTT GCGGGATTGT TGCTGCTTTG TGCGGCTATT
TGGTATTCGC AGCGCCACCG CAAAGCGATG ATGAATACGC TCTTGATGTC GCTCTTGTTG
CTTGTGATTG GCTACACTTC GTATGGAATG ATTTATGTGC GTGCCCAAGC AAATCCCCCT
ATTAACGAAA ACAATCCGTC AACTACGGAA AGCTTTTACG CCTATTTGAA TCGTGATCAA
TATGGCGATA TGCCGCTTTT TCCACGTCGT TGGTCGCCTG AACCGATCCA TCAATATTTC
TACGAACAAT ACTCCAGCGA CTTCGATTAC TTTACGCGCT ATCAAATGCA GAAGATGTAT
TTGCGCTACT TTGGATGGCA GTTTATTGGG CGTGAGCACG ATATGGAGGG GGCTGGTGTT
GATTGGTCGG TGTTGTGGGG GCTTCCATTT TTAGTAGGAC TTGTTGGGGC TATCAGCCAT
TTTCGGCGCG ATTGGCAGAT GGGGGTGGTG GTTACGGCGC TTTTTGTGTT AACGGGGGCA
GCCTTGGTGA TTTATTTAAA CCAAACGGAG CCGCAGCCAC GGGAGCGCGA TTATAGTTAT
GCAGGAAGCT TTTTTGCCTT TGCCTTGTGG ATTGGTATTG GGGTAGAAAG TTTGTGGCAG
TGGCTTGCAG GGCGCATGAA AGCCTCATCC GAAAAGTTGC CCGTAGTTGC CTTAAGCGTG
GTTGGTTTGG CGCTTTTGTT GGTGGATGGG CGCATGTTGA TGGCAAATTA CCGCACGCAT
GATCGTTCGG GAAACTATGT ATCGTGGGAT TGGGCGTGGA ATATGCTCCA AAGCTGTGAG
CGCAATGCAA TTCTTTTTAC CAATGGTGAT AACGATACCT TTCCGCTTTG GTATTTGCAG
GAGGTTGAAG GTATTCGGCG CGATGTTCGT GTGGTGAATT TAAGCCTTGC CAATACGGGT
TGGTATTTGG AGCAACTGAA AAACAGTTCG CCTCGCGGTG CAAAGCCTGT GAATTTTAGC
ATGAGTGATG GAGAGTTAGC AACCATTAGT TACATGCCTA TTGATTCGGT GGATGCCATA
CTTCCCTCAT CCACCGCACG CCGTAGCTTA CTACGCGATA CGTGGCGCAG TGGAAATAAT
TTACCATCAG CGCCGCTTGA CACCATGGTA TGGCCTTTAA AGCCAGGGCT TACTTACGAT
GGGCAGGGCT ATTTGCGTCC GCAAGATTTA GCGGTGTACG ATATTGTTAT GAGCAATTTT
GAAGATCGCC CAATTTACTT TGCCTTAACG GTTGATCCCG AAAGCATGAT TGGGCTTGAT
ACCTTTTTGC GTCTTGATGG CTTGGTGTGT AAAGTGGTGC CTGTTAAAAG CAGTGATCCT
ATGAGTTATA CCGATCCGCT TATTCTCTAT CAACGCTTAA TGCAGGTGTA TCGCTATCGC
AACTTGGCAA ATAAGCATGT TTATCTCGAA GAAACATCGC TTCGTCTTTC AAGCAACTAC
ACGCCGCTCT TTGTGCGCCT TGCGTTGGAA TTAGCTACTC AGCCCGAAGA GACTCTTGCT
GTTACTGATG GCAATGGTGT GCCACGATTG GTGCGTCGCG GCGCATTAGC GTTGCAGGTG
CTTGATAGTT CAGAGCGCTT TATGCCACTT TCTCGTTATC CTGTAAATCC TGAACTTGCA
GCATCAATCA TTGCTCTTTA CGTACAACTT GGCGAAAAGC AGAAAAGCTC GCCATATATT
TCCTATCTTG AAGCTCTAAG CCATACGAAT TCGCCGCTTA TGGAGCCTCG CTTGTTTTTA
ATTTTAGCGC GTGCTTATTA CTCGTTAGGG CGTGAAGCCG AAGCAAAAGC CATTGTGCAG
CAGCTTGCTC GTGAGTTAGA TCAACCAGAG CTGCTTAAAA CCTTTGAAAC CACGAAGAAA
TAG
|
|---|
| Protein sequence | MTHPPFHRLI AFLLFLGAEV LYLATMAPTF SFWDCGEFIA TAVTLGIPHP PGAPLYLLLG
RLFAMIPFVS DIGARVNVIS TLASSATVML TYLITVRFIT LYRKHPINEW SRSEQIAAYG
GAAVGALALA FSDSFWFNAV EAEVYALSSL FTALVVWLML RWHEEAPKAG NERWLLLVMY
IIGLSIGVHL LSLLAVFAVA LAYYFKKHQV TLVSFGWLVV VSLALFFLIY VVIIKGLPVL
FQVASWWGLL AGLLLLCAAI WYSQRHRKAM MNTLLMSLLL LVIGYTSYGM IYVRAQANPP
INENNPSTTE SFYAYLNRDQ YGDMPLFPRR WSPEPIHQYF YEQYSSDFDY FTRYQMQKMY
LRYFGWQFIG REHDMEGAGV DWSVLWGLPF LVGLVGAISH FRRDWQMGVV VTALFVLTGA
ALVIYLNQTE PQPRERDYSY AGSFFAFALW IGIGVESLWQ WLAGRMKASS EKLPVVALSV
VGLALLLVDG RMLMANYRTH DRSGNYVSWD WAWNMLQSCE RNAILFTNGD NDTFPLWYLQ
EVEGIRRDVR VVNLSLANTG WYLEQLKNSS PRGAKPVNFS MSDGELATIS YMPIDSVDAI
LPSSTARRSL LRDTWRSGNN LPSAPLDTMV WPLKPGLTYD GQGYLRPQDL AVYDIVMSNF
EDRPIYFALT VDPESMIGLD TFLRLDGLVC KVVPVKSSDP MSYTDPLILY QRLMQVYRYR
NLANKHVYLE ETSLRLSSNY TPLFVRLALE LATQPEETLA VTDGNGVPRL VRRGALALQV
LDSSERFMPL SRYPVNPELA ASIIALYVQL GEKQKSSPYI SYLEALSHTN SPLMEPRLFL
ILARAYYSLG REAEAKAIVQ QLARELDQPE LLKTFETTKK
|
|---|
| |