| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0160 |
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| Symbol | |
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| ID | 3747725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 180237 |
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| End bp | 181553 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637772687 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_378481 |
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| Protein GI | 78188143 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00134878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATTC TACTTAATAA GCTTGTTATT ATTTTTGAAT TCGTTGTCGG AGTTACAACT
CTTCTGCTGG GAGCGGATTT TCTGGGTGTA GAGTGGAAAC AGTATCCATT TCTGCAAAGA
CTTGATGGTC AACAACCTCT GTTGTTACTC TTAACTTTCT GTTCACTATT GTCAATATTG
GTCATTAAAC TAAAAAATAA TTCTCCTGCG TTTGAAGCCG TGCAAACAAA AGATGGTACA
ACCATCGTTA AAGCTACACT TTCAGGCTTT GAGCAAGAGT TGGACGATGC GGCTGATGAG
ATCAAAAAGA AAGCACAAGA GTACTTTGAA GCTGGTGAGC GTGATTTTGC CAATGAGCAG
TATGCACAAG CAGCAAGCAA CTATAAAGCT TCGTTTGAGC TATTGCCAAC AATGGCTGCC
AGCTTGAACG CCGGTATTGC TTTTAGTATC ACATCGGATT ACCAAGCAGC AGAAGAGCTT
TATCAACAAG GATTGAGAAT AGCACAACAT AAAAGAGATA AAGAGTATGA AGCTGCTTTT
CTTGGCAACA TTGGGGTCGG TTATAGATCC TCAGAAAAAT TCGCTGATGC TCTCGACTAC
CAACAGAAAG CGTTCAAGCT TAACCAAACG ATCAGAAATC AGAGAGGACA AGCTAACCAA
TTGTGCAATA TTGGACTTAT TTACAACGAC AAAGGTCTGC TCGATGCGGC TCTTGGATAT
TTCAAACAAT CGCTGGAGTT ATACGAAACC ATTGGAGACA CATCAGGGCA GGCTCAAAAC
CTCAGATCAA TCGGAATAAT TTATAGGAGA AAAGGCAAAC TCAACGAGGC ACTCTCTTGC
CACCAGCAAG CTCTTAATAT TGACAAAGCT AATAAAAACG CTTCAGGAGA AGCTGAAAAC
CTTAACAATA TCGGAATCAT TTATAAGGGG AAAAAAGAAT TTGACAAGGC ACTTAATTGC
TGCTATCAGG CACTTGATAT ATGTAAACGT ATAGGATACA AATTTGGAGA GGGTCTTGCA
TTATCAGCTA TCGGCGTAAT TTATTACTCA AAAGGAGAAC TTGATAACGC TCTTGATTAC
TGTAATCAGG CGCTTAAGCT TTACAAAAGC ATAGATTCCC ATCTTATTGC ACAGGCCGAA
AACCTTAATA ACATTGGTCT AATTTATCAA GATAAAGGAC AACTCGATCA AGCGCTTATA
TATCTGGGGC AATCGTACTT ACTTTTCCAG AAGACAGGAG TAACTTTACA ATTGAAAAAA
ACCGAAGCAA ACATTCAAGA AGTTAAGCGA CTACAAGCCG CAAAGGGCAA AAATTAG
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| Protein sequence | MNILLNKLVI IFEFVVGVTT LLLGADFLGV EWKQYPFLQR LDGQQPLLLL LTFCSLLSIL
VIKLKNNSPA FEAVQTKDGT TIVKATLSGF EQELDDAADE IKKKAQEYFE AGERDFANEQ
YAQAASNYKA SFELLPTMAA SLNAGIAFSI TSDYQAAEEL YQQGLRIAQH KRDKEYEAAF
LGNIGVGYRS SEKFADALDY QQKAFKLNQT IRNQRGQANQ LCNIGLIYND KGLLDAALGY
FKQSLELYET IGDTSGQAQN LRSIGIIYRR KGKLNEALSC HQQALNIDKA NKNASGEAEN
LNNIGIIYKG KKEFDKALNC CYQALDICKR IGYKFGEGLA LSAIGVIYYS KGELDNALDY
CNQALKLYKS IDSHLIAQAE NLNNIGLIYQ DKGQLDQALI YLGQSYLLFQ KTGVTLQLKK
TEANIQEVKR LQAAKGKN
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