| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0100 |
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| Symbol | trmE |
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| ID | 3747588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 114064 |
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| End bp | 115485 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637772626 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_378421 |
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| Protein GI | 78188083 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.651435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTAATT CTCTCTCTTT TCAAGATGAG CCAATTGTTG CTTTAGCAAC GCCGCTTGGA
GTTGGTGCTT TAGCCGTGGT GCGTATGAGC GGTCAGGGTG TTTTTGATAT TGCTCGAAAG
GTTTTCCATA AACAAGGTGC GCCCGATTTT CATTTAGCAA GCTCCAAAGG CTTTCAGGCG
CACTTTGGAA CCATTCACGA TGCCCAAGGT GTGGTTGATG AGGTGATTGC GCTGGTGTTT
CGCTCCCCGC GTTCTTTTAC TATGGAGGAT ATGGTAGAGT TTAGCTGCCA TGGGGGACCC
GTTGTGGTGC AGCATTTGCT GAAAGCGCTC ATTGATGCAG GGTGCCGCTT GGCAGAGCCC
GGTGAGTTTA CGCGACGCGC TTTTCTTAAC GGGCGCATTG ATTTATTGCA GGCAGAAGCT
ATCGGCGAAA TGATTCATGC GCGTTCAGAA TCGGCATTTC GTACCGCAGT TACCCAAATG
CAGGGCAGGC TTTCGCGCCA ACTTGAGGAG ATGCGCGAAA AGCTGTTGCA TTCGTGCGCA
TTGCTTGAGC TTGAGCTTGA TTTTAGCGAA GAGGATGTAG AGTTTCAAAA TCGTGAGGAG
TTACGTGAGG ATGTGCAACG CTTGCAGGGT GAAATTAACC GCTTGCTTGA TTCCTATCAA
CATGGTCGTT TATTGAAAGA GGGAGTTGCA ACGGTGCTTG TTGGTTCGCC CAATGCAGGC
AAATCAACAC TTCTCAATGC ACTGTTGGGT GAAGAGCGCT CCATTGTAAG CCATCAGCCG
GGCACCACAC GCGATTACAT TGAGGAGCCG CTTTTGCTCG GCTCAACCCT TTTTCGCCTT
ATAGATACGG CTGGTTTGCG GGAAGGTGAA GAGGAGGTTG AGCATGAAGG CATTCGACGA
AGCTATCGCA AAATAGCCGA AGCTGATGTT GTGCTTTATC TGCTTGACGT GAGCCATCCC
GATTATTGTA ACGAACTATC TGATATTACC TCATTACTTG AGCAAGCCTC GCCAAACGTG
CAGTTACTTT TAGTTGCCAA TAAGTGCGAT GCCATCACTA ATCCGACGGA GCGTTTAGCG
CAATTGCAGG CTGCCATGCC GCAAGCCACT GTTTGCGGTA TTGCTGCAAA AGAGGGGGAT
GGTTTAGAGG CGCTCAAGCA ACAAATGAGC AACATGGTTG CAGGACTTGA TAAGTTGCAC
GAGGCAAGTG TGCTTATTAC CAGTATGCGC CATTACGAAG CTTTGCGCCG TGCCTCCGAT
GCACTTGAAA ATGGAGCATG TTTAGTAGCA GAGCACGCTG AAACAGAGTT AGTTGCCTTT
GAGCTTCGTT CGGCGCTTGA AGCCGTTGGT GAAATTACTG GGAAGGTGGT GAACGATGAA
ATTCTCTCGC TTATTTTTGA GCGCTTTTGT ATTGGGAAGT GA
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| Protein sequence | MRNSLSFQDE PIVALATPLG VGALAVVRMS GQGVFDIARK VFHKQGAPDF HLASSKGFQA
HFGTIHDAQG VVDEVIALVF RSPRSFTMED MVEFSCHGGP VVVQHLLKAL IDAGCRLAEP
GEFTRRAFLN GRIDLLQAEA IGEMIHARSE SAFRTAVTQM QGRLSRQLEE MREKLLHSCA
LLELELDFSE EDVEFQNREE LREDVQRLQG EINRLLDSYQ HGRLLKEGVA TVLVGSPNAG
KSTLLNALLG EERSIVSHQP GTTRDYIEEP LLLGSTLFRL IDTAGLREGE EEVEHEGIRR
SYRKIAEADV VLYLLDVSHP DYCNELSDIT SLLEQASPNV QLLLVANKCD AITNPTERLA
QLQAAMPQAT VCGIAAKEGD GLEALKQQMS NMVAGLDKLH EASVLITSMR HYEALRRASD
ALENGACLVA EHAETELVAF ELRSALEAVG EITGKVVNDE ILSLIFERFC IGK
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