| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0078 |
|---|
| Symbol | |
|---|
| ID | 3746412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 88598 |
|---|
| End bp | 89590 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637772604 |
|---|
| Product | Elongator protein 3/MiaB/NifB |
|---|
| Protein accession | YP_378400 |
|---|
| Protein GI | 78188062 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0502] Biotin synthase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00433] biotin synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCATC CAGCTATTGA GTCTGCCTAC CGCGTGCTTG CTACGGGCGA GCCGTTAACG
CATGGGGAGG CGTTGCAGCT TGCCAATCTA TCGGGTAGTG ATTTGCTTGA TTTAGCATCG
TTGGCGCACA AAGTGCAGCT TCGTTACGCT GGTGGCGTAG AAAGCTTTCA TGCTTGTTCT
ATTATGAATG CCAAGTCGGG CGTATGTGGC GAAAATTGCC GTTTTTGCGC TCAATCAAAG
CACAACAACG CCGCTATTGA GGTGTATGAT TTGGTAAGCG ACGATTCTGT TTTAATTGAA
GCGCGTCAAG CGGTTGCTAA CGGTGTTTCG CATTTTGGCA TTGTAACCAG CGGCTATGGC
TATCAGCGCA TAACTCCCGA ATTTGAGCGC TTGCTTGGCA TGATTGATCG TTTGCATAGC
GAATTACCAT CGCTCAATGT GTGTGCATCG TTTGGCGTGT TGGGCGAAGA GCCTGTTGCG
GCGTTGGCTG CGCATGGCAT TGCGCACTAC AACATCAATC TGCAAGTGGA GCCAAATCGT
TACAACGATC TTATAGCAAC AACTCATTCG GCAGAGGAGC GCATTGCTAC CATTCACCGT
TTGCGTCAGC ATAATATTGC GGTTTGTTGT GGTGGTATTA TTGGTGTGGG TGAAAGTGTG
GAGGAGCGCA TTGGCTTACT TATAGCATTG CAAGCGCTTG ATTTAGCGGT TATTCCGCTG
AACGTTTTAG TGCCAATTGC AGGTACGCCG CTTGAAAAGA GTGAGCCACT TTCAGCCGCT
GAAGTTCTTA AAACCTTTGC AATTTGTCGC CTTCTGCATC CTCGCACTAT TATCAAATTT
GCCGCAGGGC GCGAAACCAT GATGAAAGAT TTTCAAGGAT TGTTGATGCT TGCGGGGGTG
AATGGTTTTT TAACAGGCGG CTACCTTACC ACTCGTGGAC GAGATGTTGC TGACGATCAG
CGTTTTGCGG CACAACTTGC TTCGTTTGCT TGA
|
|---|
| Protein sequence | MLHPAIESAY RVLATGEPLT HGEALQLANL SGSDLLDLAS LAHKVQLRYA GGVESFHACS
IMNAKSGVCG ENCRFCAQSK HNNAAIEVYD LVSDDSVLIE ARQAVANGVS HFGIVTSGYG
YQRITPEFER LLGMIDRLHS ELPSLNVCAS FGVLGEEPVA ALAAHGIAHY NINLQVEPNR
YNDLIATTHS AEERIATIHR LRQHNIAVCC GGIIGVGESV EERIGLLIAL QALDLAVIPL
NVLVPIAGTP LEKSEPLSAA EVLKTFAICR LLHPRTIIKF AAGRETMMKD FQGLLMLAGV
NGFLTGGYLT TRGRDVADDQ RFAAQLASFA
|
|---|
| |