Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0075 |
Symbol | |
ID | 3746409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 83182 |
End bp | 85578 |
Gene Length | 2397 bp |
Protein Length | 798 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637772601 |
Product | DNA topoisomerase I |
Protein accession | YP_378397 |
Protein GI | 78188059 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA [COG0551] Zn-finger domain associated with topoisomerase type I |
TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTCAT CAGTAGCAGC ACTCTCTGCC AAAAATAAAA CCCTCATTGT GGTTGAGTCG CCGTCAAAGG CAAAAACCAT TAACAAGTAT CTCGGCAGCA ACTATACGGT TTTCGCCTCC GTCGGGCACA TTAAAGATTT ACCGAAAAAA GAGATTGGGC TCGACTTTGA ACATAACTAC TCCCCTCGTT ACGAAATTAT TCCCGGTAAA GAAAAGGTAG TAAAGCAGCT TAAAAAACTT GCGACTGAAG CCAGCAACAT TTTGATTGCT ACTGACCCTG ACCGCGAGGG TGAAGCTATT GCATGGCACA TTGCGAACGA AATAGAACAT GCCAAAGCAC CCGTTGCCCG CGTGCTCTTT AACGAAGTTA CCAAAAAAGC CATTCTTGAG GCAATTGAAA AACCTCGCCA TATTGACTTG CGCCTTGTGC ATTCCCAGCA AACAAGGCAG GGGCTCGATA AAATTGTAGG TTATAAAATC AGCCCATTTT TGTGGAAAGT GGTGCTGCGT GGATTATCGG CAGGGCGCGT ACAATCGGTG GCGTTACGCC TTATTTGTGA GCGTGAAGAG GAGATTGAGC GCTTTGTTAT TCAAGAATAT TGGACTATTG CTGCCGATTT TCTAACGGCA AACAAAGAAT CCTTCCGCGC CCGCTTAGTG CGTTTGGATG GCGATAAACC TGAAATCACG AATGTAGAGC AAGCAGAAGC TATTGCCGCT ATTGCCAAAA AAGGCAACTA CAGCGTTCGC GAAATTACTC CTCGCATTCA ACAACGAAAA CAGCCGCTAC CGTTTACGAC ATCGTTGTTG CAGCAAGCCG CCTCTAACCA GCTTGGTTTT GGTGCACAGC GCACCATGCG CACCGCCCAG CAACTTTACG AAGGTATTGA ACTTGGTGCT GAAGGTGCTA TGGGTCTTAT TACCTACATG CGTACCGACT CCACACGCAT TAGCCCCGAA GCAGTTGGCG AAGCACGCAA CTACATTGAG CGCAATTTTG GCAAAGATTA CGTTGGAGCT GGTAGCAGCG GCAAACCCGG CAAAAATGCT CAAGATGCCC ACGAAGCCAT TCGCCCCACC TCGCTCCTTA AAACGCCTGA ACAGGTAAAA CCCTACCTCT CCGCCGATCA ATTCAAGCTC TATGAATTAA TTTGGAAGCG CTTTCTTGCT GCAATGATGG CTCCCGCTAA AATTGAGCAA ACAAAGGTTG ATGTTGAGGA GCAAAGCGGC AAATTTCTTT TTCGAGCAAA TGGAAGCCGC GTACTCTTCC CTGGCTTTAT GCGCGTTTAT GACGATCAGC AAGAGCTTGC ATATGAGGCA CAAACCTCCA CAAAAGAAGA GGTGGAAAAT GAAATGGTGG TAAAACTTCC AGAAAAACTT GCCGTTAATG ACCCGCTTGG GCTTGGCGCA TTAGAACAAA AACAAAGCTT TACCCGTCCA CCTGCTCGTT ACAGCGAAGC AAGCTTAGTA AAAGACCTCG ACCACTTTGG CATTGGGCGC CCATCAACCT ACGCCTCTAT TTTTTCAACT TTGCAAGATC GCCGCTATGT GGCACTTGAA AAGCGCAAAA TTATGCCCAC CGATCTTGGG CGTGATGTTG CTAAAATTCT TGTAGCCAAC TTCCCCGAAC TCTTTAACGT TGGCTTTACC GCCTTTATGG AGGACGAGCT TGATAAAGTT GCAAGTGGCG ACGATGCGTA TGAAAAAGTG CTCGATAGCT TTTACAAGCC TCTCACATCA GCTTTAGCGC TTCGCAGTGC CACGCCACTC ATTCCGCAAA ACAACGAAGC CGAAACATGC GACAAATGCG GCACAGGCAA AATGATTTTA AAATGGACAG CAAGCGGCAA ATTTCTTGGA TGCTCCAACT ATCCCAAGTG CAAAAACATT CGCACCATTA GTAGCAATCG CGAAAAACCC GCATCAACGG GCGTGCACTG CCCCTCATGC GAAGATGGTG AAATGGTGCT CCGCAAAGGA CGACTTGGAC CATTTCTTGC CTGCTCCAAC TATCCCAAAT GCAATACGCT GCTTAACCTA AACAAGCAAC GCCACATTGA GCCACCGAAA ACACCACCCG TTGTTACCGA TATGGCGTGC CCAAAATGCG GTGCCCCACT TTACCTCCGC AGTGGCAAAC GAGGGCTATG GCTTGGCTGC TCAAAATTCC CCAAATGTAG AGGACGCCTT GCATGGACAG CGCTTGAGCC TGCTGCTCAA GAGCGATGGG AACGCGTTAT GGCTGCACAT CAAAAAGCAC ATCCCCCCGT TACCTTAAAA ATGGTTGATG GTAGTACTGT TTCAATGACC AGCTCAATTG ATGATATTAT TATGAAAGCT GACGCCGCAG GATTAATTGC TCCCGCAATG GATTTAGTGC CTGAAGCGGA GGGATAG
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Protein sequence | MASSVAALSA KNKTLIVVES PSKAKTINKY LGSNYTVFAS VGHIKDLPKK EIGLDFEHNY SPRYEIIPGK EKVVKQLKKL ATEASNILIA TDPDREGEAI AWHIANEIEH AKAPVARVLF NEVTKKAILE AIEKPRHIDL RLVHSQQTRQ GLDKIVGYKI SPFLWKVVLR GLSAGRVQSV ALRLICEREE EIERFVIQEY WTIAADFLTA NKESFRARLV RLDGDKPEIT NVEQAEAIAA IAKKGNYSVR EITPRIQQRK QPLPFTTSLL QQAASNQLGF GAQRTMRTAQ QLYEGIELGA EGAMGLITYM RTDSTRISPE AVGEARNYIE RNFGKDYVGA GSSGKPGKNA QDAHEAIRPT SLLKTPEQVK PYLSADQFKL YELIWKRFLA AMMAPAKIEQ TKVDVEEQSG KFLFRANGSR VLFPGFMRVY DDQQELAYEA QTSTKEEVEN EMVVKLPEKL AVNDPLGLGA LEQKQSFTRP PARYSEASLV KDLDHFGIGR PSTYASIFST LQDRRYVALE KRKIMPTDLG RDVAKILVAN FPELFNVGFT AFMEDELDKV ASGDDAYEKV LDSFYKPLTS ALALRSATPL IPQNNEAETC DKCGTGKMIL KWTASGKFLG CSNYPKCKNI RTISSNREKP ASTGVHCPSC EDGEMVLRKG RLGPFLACSN YPKCNTLLNL NKQRHIEPPK TPPVVTDMAC PKCGAPLYLR SGKRGLWLGC SKFPKCRGRL AWTALEPAAQ ERWERVMAAH QKAHPPVTLK MVDGSTVSMT SSIDDIIMKA DAAGLIAPAM DLVPEAEG
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