Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0040 |
Symbol | |
ID | 3747239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 44199 |
End bp | 45227 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637772566 |
Product | multidrug resistance protein A |
Protein accession | YP_378362 |
Protein GI | 78188024 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.984941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTGATA ATACAACGCC CCCTGAAGGC ACAAATAATG GCTCAAAAAA ATCCTCTTCT CCTCTCCGCA TGGGAATTAT TGGGGTACTG CTTGTAAGCG CACTTGGCGT TGGCGGAAGC TACCTCTACC ACTCCATGCT GTACGAAAAA ACCGATAATG CTCAAATTGA GGGCGATATT TATCCCGTTA TTTCTCGTAT AGCGGGCAAA GTTGCTGAAG TACGCGTGCG CGATAATCAA ATGGTTGCTC GTGGCGATAC GTTGCTCACA CTTGATCGTT CCGATGAGCT TGTGCGGCTG AATATGATGG CGGCGGAATT GCAAAGCGCC CAAGCGGCGG TAAGCGTGGC ACAGAGCCAA GCGGAAGCGG CACATGCTGC CGTAAGTGCT GCCGAAGCCA CTAACCGTAA AGAGCAAAGC GATTTACAGC GTTACAGTAA GTTGTTAAAG CAAGAGGTGA TTTCGCCCGC TGAGTTTGAT GGTGTAAAAG CACGAGCTGA AGCCGCTGCC GCTCAACTGC TTGCACTCCG CAGTCGTTAC CAAGCGGCAC AAGCCGAACT TCCACTCAAA CAAGCGGACG CGCTCAAGCG GCAAGCCACC TTGCAGGAAG CCGAGCTGAA ACTCTCCTAC ACCGCCCTTA CGGCACCAGC CAATGGACGA GTTGCAAAGA AAAACGTTCA CATTGGGCAA TACGTAGCGC CCGGGCAGCA ACTGATTGCG CTGGTTGGCA ATAACGATCT ATGGGTTGTG GCAAATTTTA AAGAGACGCA ATTGGAACAC CTTGTTCCCA ATCAAGCGGT GATTATTGAA GTGGATGCTT ACCCCGGTAA GGAATTTAGC GGCACCATTG AATCGCTTTC ATCGGGCACA GGAGCAAAAT TCGCTCTTCT CCCACCCGAT AACGCCAGCG GCAACTTTGT AAAAGTAACG CAGCGCGTAC CCGTTAAAAT TCTCTTTACA GAAAAATTAG ATAAACGCTA CCCCCTTGCG GCTGGTATGA ATGTAACCGT AGCCGTTAAG GTGAAATAA
|
Protein sequence | MADNTTPPEG TNNGSKKSSS PLRMGIIGVL LVSALGVGGS YLYHSMLYEK TDNAQIEGDI YPVISRIAGK VAEVRVRDNQ MVARGDTLLT LDRSDELVRL NMMAAELQSA QAAVSVAQSQ AEAAHAAVSA AEATNRKEQS DLQRYSKLLK QEVISPAEFD GVKARAEAAA AQLLALRSRY QAAQAELPLK QADALKRQAT LQEAELKLSY TALTAPANGR VAKKNVHIGQ YVAPGQQLIA LVGNNDLWVV ANFKETQLEH LVPNQAVIIE VDAYPGKEFS GTIESLSSGT GAKFALLPPD NASGNFVKVT QRVPVKILFT EKLDKRYPLA AGMNVTVAVK VK
|
| |