| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_0039 |
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| Symbol | |
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| ID | 3747238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 42581 |
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| End bp | 44194 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637772565 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_378361 |
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| Protein GI | 78188023 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.677272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAACG CACCTTCTCT TTCAGCCTCG CCAAAGCTAC TCGGCACCAC CGAAGAGCAT
TACGAAACAG GGTGGCGCAA GCTCATTATC ACCTTGACGG TTATTGTTTC CGCCATGCTG
GAGCTGATTG ACACCACCAT TGTTAATGTG GCAATTACGC AAATTAGCGG CAACCTTGGA
GCCAGCATTG AGGACACCGC ATGGGTGGTA ACAAGCTACG CCATTGCAAA CGTTATTGTA
ATTCCACTCT CAGGCTTTCT TGGCAATTTG CTTGGGCGGC GGAACTACTA CATTGGCTCC
ATTCTGCTCT TTACCGTCGC CTCTCTCCTG TGCGGCGTTG CAACCGACAT TTGGACACTT
GTCTTTTTCC GCTTTGTGCA AGGCATTGGC GGTGGCGCAC TGCTCCCCAC CTCGCAAGCC
ATTTTGTACG AAACCTTTCG CCCCGAAGAG CGCGGCAAAG CCACCGGTAT TTTTTCAATG
GGCTTAGTGC TTGGACCAAC CATTGGACCA CTTTTAGGCG GCTACTTAGT AGATTATTTC
AATTGGGAAT GGTGCTTTTT TGTCAACATT CCTATTGGAC TGTTAGCTGC TTGGTCATCC
TTTATTTTTC TTAAAGAGCC AAAAGTTACC CACACTGTCT CAAAAATTGA TTGGGCTGGA
ATTGGCTTAC TTGCCGTTGG CATTGGTTCC CTGCAATTCA TTTTAGAGCG AGGAGAATCC
AAAGATTGGT TTGAAACCCC CTACATTACA TGGTTTACCA TTATTGCCGT ACTTTCGCTG
ATTGCGTTTG TATGGCACGA ACTTCACACT AAGGAGCCTG CCGTTGACCT TCGTGTGCTG
GCACGAAGCC ACAATTTGCC CATTGCTGCC GTGCTCACCT TTATTGTCGG CTTTGGTTTG
TACGGTTCAC TCTTTGTTTT TCCCGTTTTT GTGCAAGGGC TGCTTGGTTT TACCGCTGTG
CTCACCGGTT TAGTGCTCTT CCCCAGCGCT ATGGTTACCG GTATGATTTC CATGCCACTT
GGCATGGCGC TGCAAAAAGG TGCCTCACCA AAGCATTTAA TGCTCTTTGG AATGCTCACC
TTTTCACTTT TTTGCTGGCT ACTGGGGCAA CAAACCTTGC AATCAGGCGC CGAAAACTTT
TTTTGGATAT TGCTGCTTCG CGGCATTGCA CTCGGCTTTA TTTTCATTCC CGTTACCATG
CTCGCAATTT CGGGATTGCA TGGCAAAGAT ATTGGACAGG CAACTGGCTT AAACAACATG
GTGCGCCAAC TTGGCGGCTC ATTCGGCATT GCTATTGCCA ACACCTACAT CGCCAAACGA
GTAGCCGCAC ACCGCACCGA GCTACTAAGC CATCTTTCGC CTTACGACCC CGAAGCAATG
AACCGCATAC ACGCCATTGC CGCCAAAGCC ACTGCTGAAC ACGGGCTGCC ACCCGCAAGC
GCCGAACTTG CCGCCCTGAA AGCGCTTGAA GGTACGGTAA CCGTGCAAAG CACGCATCTT
GCCTTTATGG ATGCCTTTAT GCTGATTGCT CTTCTTTTTC TCTGCGCTGT GCCACTACTC
TTTTTTATTC GGCTGCATAA GGGGGAACAG GCAAGTGCAA TGGGGGGGCA TTGA
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| Protein sequence | MANAPSLSAS PKLLGTTEEH YETGWRKLII TLTVIVSAML ELIDTTIVNV AITQISGNLG
ASIEDTAWVV TSYAIANVIV IPLSGFLGNL LGRRNYYIGS ILLFTVASLL CGVATDIWTL
VFFRFVQGIG GGALLPTSQA ILYETFRPEE RGKATGIFSM GLVLGPTIGP LLGGYLVDYF
NWEWCFFVNI PIGLLAAWSS FIFLKEPKVT HTVSKIDWAG IGLLAVGIGS LQFILERGES
KDWFETPYIT WFTIIAVLSL IAFVWHELHT KEPAVDLRVL ARSHNLPIAA VLTFIVGFGL
YGSLFVFPVF VQGLLGFTAV LTGLVLFPSA MVTGMISMPL GMALQKGASP KHLMLFGMLT
FSLFCWLLGQ QTLQSGAENF FWILLLRGIA LGFIFIPVTM LAISGLHGKD IGQATGLNNM
VRQLGGSFGI AIANTYIAKR VAAHRTELLS HLSPYDPEAM NRIHAIAAKA TAEHGLPPAS
AELAALKALE GTVTVQSTHL AFMDAFMLIA LLFLCAVPLL FFIRLHKGEQ ASAMGGH
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