Gene Cag_0014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_0014 
Symbol 
ID3747884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand+ 
Start bp16209 
End bp16631 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content49% 
IMG OID637772538 
ProductHolliday junction resolvase YqgF 
Protein accessionYP_378336 
Protein GI78187998 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.639301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCTTT ACCAACGAAT TGTTGCCATT GATTACGGCA CGAAACGTAT TGGCGTTGCA 
AAAAGCGATC CACTCGGCAT GTTTGCGCAG CCCATTGGCA CGGTTGACCG TGCTGGATTG 
TCGAAGCTGT TAAGCCCCAT GGTAGAAGCT GGTGAGGTGC AATTAGTGGT GGTTGGCTAT 
CCCCTCAATC GGCATGGCGA GCAAACTGCT ATGACGGAGG TGATTGACCG CTTTATTGAG 
TCGTTGCGGC TTGAATTTCC AGCTCTTCCT ATTGAAACAA TTAATGAGCA TTGTTCGTCC 
AAAAGCGCCA TGCAACTCTT AGTTGCTTCG GGCACGTCGC GCAAAGAGCG CAAAACCAAA 
GGACGACTTG ATACTGCGGC GGCGTGTTTG CTGCTTAGTG ATTATCTTGA ACAGCAGAAA 
TAA
 
Protein sequence
MPLYQRIVAI DYGTKRIGVA KSDPLGMFAQ PIGTVDRAGL SKLLSPMVEA GEVQLVVVGY 
PLNRHGEQTA MTEVIDRFIE SLRLEFPALP IETINEHCSS KSAMQLLVAS GTSRKERKTK 
GRLDTAAACL LLSDYLEQQK