Gene Cag_0010 details

Gene Information

• Locus tag: Cag_0010
• Symbol: prfA
• ID: 3747880
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: +
• Start bp: 13563
• End bp: 14636
• Gene Length: 1074 bp
• Protein Length: 357 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637772534
• Product: peptide chain release factor 1
• Protein accession: YP_378332
• Protein GI: 78187994
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0216] Protein chain release factor A
• TIGRFAM ID: [TIGR00019] peptide chain release factor 1

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.116962
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCGATA AATTGCAAGC CATAAAAGAA AAACACCTCG ATCTTGAGCA AGCGCTCTCC 
GATCCATCGT TAGCCAACGA TCAAGAGCGC TTTCGTAAGC TGAATCGTGA ATACAGCAAC 
TTACGAGAAG TGGTGCAAGC TTTTGACGCT TATCAGCGCA AAGCAACCGA GCTTGAAGCT 
GCCCAGCACC TTTTGGCAAC CGAAAGCGAC ACGGAAATGA AAGCGCTTGC TGAAGCTGAA 
GTTGATGAAC TGCAAGAAAC GGTTGCCGAG CTTGAACAAG GGTTAAAAAT TCTCCTTCTC 
CCAAAAGAAG AAGCCGATTC GCGTAACGTT ATTATTGAAA TTCGAGCAGG CACGGGTGGC 
GATGAAGCCT CGCTTTTTGC TGCCGATTTA ACGCGCATGT ATCAACGCTA TGCAGAGCAA 
AAAGGGTGGC AATACAAAGT GCTTGATTAC AACGAAAGCT CTGTGCCTGG CGGCTTTAAA 
GAGATGATTT TGGAGATAAG CGGCAACAAC GTTTTTGGCA CCATGAAGTA TGAAAGTGGT 
GTGCATCGTG TGCAGCGCGT GCCCGATACC GAAGCGCAAG GGCGTATTCA CACCTCAGCC 
GTAAGCGTGG CAGTGTTACC CGAAGCCGAA GAGGTTGATG TTGAAATTCG TCGCGACGAT 
CTCCGATTTG ATACCTATCG AAGTGGTGGC AAGGGAGGGC AGAACGTCAA CAAAGTTGAA 
ACAGCCGTGC GCATTACCCA TATGCCAACA GGTATTGTTG CCGCATGTCA AGAAGAGCGC 
TCACAGCTTC AAAACAAAGA GCGAGCGATG CAAATGCTGC GCACCAAGCT CTACGATATT 
CAGCTTGCCG AGCAACAGCA GCAACGTGCC GATTTGCGCC GCACCATGGT GGCAACGGGC 
GATCGTAGCG CAAAAATTCG CACTTACAAC TACCCACAAT CGCGCGTAAC CGATCACCGC 
ATAGGCTTTA CCAGCCACGC TCTGCCGCAA ATTATGCAGG GTGAACTGCA CGAAGTGATT 
GAAGCGCTCA TTATGCACGA TCAAGCGGAG AGGCTAAAAA GCGAATTGCA ATAA 

 

Protein sequence

MLDKLQAIKE KHLDLEQALS DPSLANDQER FRKLNREYSN LREVVQAFDA YQRKATELEA 
AQHLLATESD TEMKALAEAE VDELQETVAE LEQGLKILLL PKEEADSRNV IIEIRAGTGG 
DEASLFAADL TRMYQRYAEQ KGWQYKVLDY NESSVPGGFK EMILEISGNN VFGTMKYESG 
VHRVQRVPDT EAQGRIHTSA VSVAVLPEAE EVDVEIRRDD LRFDTYRSGG KGGQNVNKVE 
TAVRITHMPT GIVAACQEER SQLQNKERAM QMLRTKLYDI QLAEQQQQRA DLRRTMVATG 
DRSAKIRTYN YPQSRVTDHR IGFTSHALPQ IMQGELHEVI EALIMHDQAE RLKSELQ