Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0009 |
Symbol | |
ID | 3747879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 12186 |
End bp | 13547 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637772533 |
Product | peptidase M50, putative membrane-associated zinc metallopeptidase |
Protein accession | YP_378331 |
Protein GI | 78187993 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000631419 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATACCA CCTTTTACTT TATTATTGCA ATTTTCATTT TGGTAACAGC GCATGAGCTG GGTCATTTTT TAACGGCAAA GCTTTTTGGA ATGCGCGTTG AAAAATTTTA CATCGGCTTT GATTTTTGGA ATCTTCGCTT ATGGAGCAAG CAAATTGGCG AAACGGAGTA TGGTATAGGC TTGATTCCAC TGGGTGGTTA TGTAAAAATT TCAGGGATGG TGGATGAAAG TTTTGATACC GATTTTCAAG GCAAACCACC GCAGCCGTGG GAGTTTCGAG CAAAGCCTGT ATGGAAGCGC TTAATTGTGC TTGCGGGTGG CGTTGCTATG AATATGCTGC TTGCTGCGGC TATTTTTGTT GGCGTAACCA TGAGCATTGG TGAATCGCGT ACCAGCGTTA GCACACCAGC GTATGTTGAG CAAGGTTCCG TTTTTGCTGA TATGGGCATG CAAACGGGCG ACCTTATTCA AGCGGTGAAT GGTAAAGCGG TTGAAAGTTG GGAAGAGGCA CTTGACCCTG AATTTTTTAC CGCATCAACT CTTACCTACA CGCTTCTTCG CAATGGGCAA GAGGTTACCG TTACAGCACC ATCAAATATT ATGTCGCTCA TTAACGACCA AAAAGGGCTT GGGATTCGTC CCGTGATGCC GCCACTTATT GGTGAAGTGT TGCCCGATAT GCCTGCTCGT GCGGCTGGCA TTCAGCCTAA TAGTGTGATT GTAGCCATTA ACGGCAAGTC GGTTGTTGAT TGGCATGAGG TTGTTGGCAC CATTTCAGCA AATGCAGGCA AGCCATTACA AATTACATGG AAGCATCTTG CCTTTGCTGA TGGCAAAGAG CCCTCCGTTG CCGATATTCG TGCTTCGGGT GAAATGTTTG TGGCAACCAT TGTGCCAACC GAAGCAGGTA AAATTGGCAT GGCACTTCAG CAAACCATTG CAAGCGAACG TCGTAAGCTT GGCATTGGTG AATCGCTGAC AAGCGGCGTG CAGCAAACAT GGAAAGCCAC CGTGATGACG GTGCAAGGCT TTGGCAAAAT TCTTACAGGC AAAGAAGATT TAAGCAAGTC GGTGGGTGGA CCTCTTAAAA TTGCAGAAAT TGCTGGGCAG AGCGCACGGC AGGGCGTGCT GGGATTCCTT TTCTTTTTAG CCATGCTCTC TATTTCGCTT GCGGTTATTA ACATTTTGCC AATTCCTGCA CTTGATGGTG GGCAGTTTGT GCTGAACGCC ATTGAGGGAA TAATTGGGCG TGAACTTCCG TTTGAACTGA AAATGCGCAT TCAACAAATT GGCGTTGCCT TGCTGATGTC CTTCTTTGCC TTCATTTTTA TTAACGATAT TTTGAACTTC TTTAAGCGTT AA
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Protein sequence | MDTTFYFIIA IFILVTAHEL GHFLTAKLFG MRVEKFYIGF DFWNLRLWSK QIGETEYGIG LIPLGGYVKI SGMVDESFDT DFQGKPPQPW EFRAKPVWKR LIVLAGGVAM NMLLAAAIFV GVTMSIGESR TSVSTPAYVE QGSVFADMGM QTGDLIQAVN GKAVESWEEA LDPEFFTAST LTYTLLRNGQ EVTVTAPSNI MSLINDQKGL GIRPVMPPLI GEVLPDMPAR AAGIQPNSVI VAINGKSVVD WHEVVGTISA NAGKPLQITW KHLAFADGKE PSVADIRASG EMFVATIVPT EAGKIGMALQ QTIASERRKL GIGESLTSGV QQTWKATVMT VQGFGKILTG KEDLSKSVGG PLKIAEIAGQ SARQGVLGFL FFLAMLSISL AVINILPIPA LDGGQFVLNA IEGIIGRELP FELKMRIQQI GVALLMSFFA FIFINDILNF FKR
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