Gene Cag_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_0009 
Symbol 
ID3747879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp12186 
End bp13547 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content46% 
IMG OID637772533 
Productpeptidase M50, putative membrane-associated zinc metallopeptidase 
Protein accessionYP_378331 
Protein GI78187993 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0750] Predicted membrane-associated Zn-dependent proteases 1 
TIGRFAM ID[TIGR00054] RIP metalloprotease RseP 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000631419 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACCA CCTTTTACTT TATTATTGCA ATTTTCATTT TGGTAACAGC GCATGAGCTG 
GGTCATTTTT TAACGGCAAA GCTTTTTGGA ATGCGCGTTG AAAAATTTTA CATCGGCTTT
GATTTTTGGA ATCTTCGCTT ATGGAGCAAG CAAATTGGCG AAACGGAGTA TGGTATAGGC
TTGATTCCAC TGGGTGGTTA TGTAAAAATT TCAGGGATGG TGGATGAAAG TTTTGATACC
GATTTTCAAG GCAAACCACC GCAGCCGTGG GAGTTTCGAG CAAAGCCTGT ATGGAAGCGC
TTAATTGTGC TTGCGGGTGG CGTTGCTATG AATATGCTGC TTGCTGCGGC TATTTTTGTT
GGCGTAACCA TGAGCATTGG TGAATCGCGT ACCAGCGTTA GCACACCAGC GTATGTTGAG
CAAGGTTCCG TTTTTGCTGA TATGGGCATG CAAACGGGCG ACCTTATTCA AGCGGTGAAT
GGTAAAGCGG TTGAAAGTTG GGAAGAGGCA CTTGACCCTG AATTTTTTAC CGCATCAACT
CTTACCTACA CGCTTCTTCG CAATGGGCAA GAGGTTACCG TTACAGCACC ATCAAATATT
ATGTCGCTCA TTAACGACCA AAAAGGGCTT GGGATTCGTC CCGTGATGCC GCCACTTATT
GGTGAAGTGT TGCCCGATAT GCCTGCTCGT GCGGCTGGCA TTCAGCCTAA TAGTGTGATT
GTAGCCATTA ACGGCAAGTC GGTTGTTGAT TGGCATGAGG TTGTTGGCAC CATTTCAGCA
AATGCAGGCA AGCCATTACA AATTACATGG AAGCATCTTG CCTTTGCTGA TGGCAAAGAG
CCCTCCGTTG CCGATATTCG TGCTTCGGGT GAAATGTTTG TGGCAACCAT TGTGCCAACC
GAAGCAGGTA AAATTGGCAT GGCACTTCAG CAAACCATTG CAAGCGAACG TCGTAAGCTT
GGCATTGGTG AATCGCTGAC AAGCGGCGTG CAGCAAACAT GGAAAGCCAC CGTGATGACG
GTGCAAGGCT TTGGCAAAAT TCTTACAGGC AAAGAAGATT TAAGCAAGTC GGTGGGTGGA
CCTCTTAAAA TTGCAGAAAT TGCTGGGCAG AGCGCACGGC AGGGCGTGCT GGGATTCCTT
TTCTTTTTAG CCATGCTCTC TATTTCGCTT GCGGTTATTA ACATTTTGCC AATTCCTGCA
CTTGATGGTG GGCAGTTTGT GCTGAACGCC ATTGAGGGAA TAATTGGGCG TGAACTTCCG
TTTGAACTGA AAATGCGCAT TCAACAAATT GGCGTTGCCT TGCTGATGTC CTTCTTTGCC
TTCATTTTTA TTAACGATAT TTTGAACTTC TTTAAGCGTT AA
 
Protein sequence
MDTTFYFIIA IFILVTAHEL GHFLTAKLFG MRVEKFYIGF DFWNLRLWSK QIGETEYGIG 
LIPLGGYVKI SGMVDESFDT DFQGKPPQPW EFRAKPVWKR LIVLAGGVAM NMLLAAAIFV
GVTMSIGESR TSVSTPAYVE QGSVFADMGM QTGDLIQAVN GKAVESWEEA LDPEFFTAST
LTYTLLRNGQ EVTVTAPSNI MSLINDQKGL GIRPVMPPLI GEVLPDMPAR AAGIQPNSVI
VAINGKSVVD WHEVVGTISA NAGKPLQITW KHLAFADGKE PSVADIRASG EMFVATIVPT
EAGKIGMALQ QTIASERRKL GIGESLTSGV QQTWKATVMT VQGFGKILTG KEDLSKSVGG
PLKIAEIAGQ SARQGVLGFL FFLAMLSISL AVINILPIPA LDGGQFVLNA IEGIIGRELP
FELKMRIQQI GVALLMSFFA FIFINDILNF FKR