Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0008 |
Symbol | |
ID | 3747878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 10861 |
End bp | 12009 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637772532 |
Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
Protein accession | YP_378330 |
Protein GI | 78187992 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0203346 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGCAC TCTCGATTCT TGGTAGTACT GGCTCAATTG GCTTGAGCAC GCTTGATGTT GTTCGTCAAC ATCGCGACCG TTTTACCATT GTTGGCTTAG CCGAAGGGCA TGATGTTGCA GCTCTTGCCG CGCAAATTGA GGAATTTAAA CCGCTTGCGG TGTCGGTGCG CGATGCCGAG TCGGCAAAGA AATTGCAGGA ACTGCTTGGT GCGCACAAAC CTGAAGTCTA TTATGGACTT GATGGAGCGG CTACCATTGC CGCGCTTGAT GGTGTTGATA TGGTGGTTTC GGCAATTGTT GGTGCCGCTG GCTTGCGTCC AACGGTTGCA GCCATTAAAG CGGGCAAGCA CATTGCGCTT GCTAATAAAG AGACGCTAGT GGTTGCAGGA GAGTTGGTGT CGCGTTTAGT GGCAGAGCAC AAGGTGCATC TTTTGCCGGT TGATAGCGAG CATTCGGCTA TTTTTCAATC GCTTGCTGGG CATCGCGCTG AGGATGTTGA GCGCATTATT TTAACCGCAT CAGGCGGACC ATTCCGCAAA ACATCAGCCG AAGAGCTAAA GCAAGTAACA CTTGAGCAAG CCTTAAAACA TCCGCAATGG TCAATGGGAG CAAAAATCAC CATTGATTCT GCTACGTTAA TGAATAAAGG CTTGGAAGTT ATTGAAGCAC ATTGGCTCTT TAATATGCCT GCTGAAAAAA TTGGCGTTGT GGTGCATCCA CAAAGCATTA TCCACTCTAT GGTGGAATAC ATTGATGGTT GTGTGATTGC ACAACTTGGT GCCCCCGATA TGCGTGCGCC AATTGCATAC GCGCTTTCGT GGCCTGAGCG TTGCGAAAGT GGCATTCACA AGCTTGATCT TGCCAAAATT GCAACACTTA CCTTTGAAGA GCCCGATATG GAGCGCTTTC CTGCCTTGCG CTTAGCTTTT GATGCTTTAA AAGCAGGGGG TACTTATCCA GCCGTGCTTA ATGCAGCTAA TGAAATTGCG GTAGCTGCAT TCCTTGAGCG CAAAATTGGT TTCCTTGATA TTGCTGCAAT GGTTGAAAAA ACCATGCAAG CGCATGAAGC TTTTACACCC GTAGAGCTTG AAGAGTATTT GCAGGTTGAC CGCTGGGCTC GCGATACCGC AAAAACTTTC TTACCATAG
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Protein sequence | MRALSILGST GSIGLSTLDV VRQHRDRFTI VGLAEGHDVA ALAAQIEEFK PLAVSVRDAE SAKKLQELLG AHKPEVYYGL DGAATIAALD GVDMVVSAIV GAAGLRPTVA AIKAGKHIAL ANKETLVVAG ELVSRLVAEH KVHLLPVDSE HSAIFQSLAG HRAEDVERII LTASGGPFRK TSAEELKQVT LEQALKHPQW SMGAKITIDS ATLMNKGLEV IEAHWLFNMP AEKIGVVVHP QSIIHSMVEY IDGCVIAQLG APDMRAPIAY ALSWPERCES GIHKLDLAKI ATLTFEEPDM ERFPALRLAF DALKAGGTYP AVLNAANEIA VAAFLERKIG FLDIAAMVEK TMQAHEAFTP VELEEYLQVD RWARDTAKTF LP
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