Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_0004 |
Symbol | |
ID | 3747797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 4354 |
End bp | 5295 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637772527 |
Product | hypothetical protein |
Protein accession | YP_378326 |
Protein GI | 78187988 |
COG category | [R] General function prediction only |
COG ID | [COG1090] Predicted nucleoside-diphosphate sugar epimerase |
TIGRFAM ID | [TIGR01777] conserved hypothetical protein TIGR01777 |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.128205 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATC ACATTGTAAT AACAGGCGCA ACGGGCGTTA TTGGTGTTGA ACTTGCTCAA AAGCTCATAA AGCGCGGAGA AAAAGTGGTG CTGCTTGCAC GTTCACCAAA TGCCGCACAA CAAAAAATTC CGGGGGCAGC CGCTTATGTC CGTTGGGATT CTGATATGCA AGAGGGAGAA TGGAAAAGCA CTATCAGTGG AGCCAAAGCC GTTATTCATT TAGCAGGAAA ACCACTCCTT GAAAGTCGCT GGAACGAAGA GCATAAGCAA GAATGCTACC AATCGCGCAT TATAGGGACA CGTCATATTG TGGCGGCTAT TGCTGAAGCT GCTGAAAAAC CACAAGTTTT TATCTCCTCT TCAGCAATTG GCTATTACGG CTCCTTCGAT AAATGTAGCG ACACGGCTCC TCTTACCGAA TCAGGCAACA AAGGCAGCGA CTTTTTAGCC CACATTTGTA TTGATTGGGA AGAGGAGGCT CGTAAAGCTG AAAACCTTGT GCCTCGCTTA GTGTTTTTGC GGACTGGCAT TGTGCTCTCT ACACGCGGCG GCATGTTGCA AAAAATGATG ACTCCATTCC AATATTTTGC AGGTGGTCCA ATTGGAACAG GGTTACAGTG CATCTCATGG ATTCACATGG ATGACGAAGT CAACGCTATT ATTGCATCGC TTGATAATTC TGCTTACAAA GGAGCAATTA ATCTTGTAGC TCCAACGCCC GTTTCAATGA AAGAATTTGC AAGCAAACTT GGAGCTGTTA TGGGGCGACC TTCGCTTTTG CAAGTACCTG AATTTGCAGT CAAAATGCTT ATGGGCGAAG GGGGAGAATA TGCTGTTCGA GGGCAAAAAG TGCTTCCTAC CTTTCTTGAA AAACAAGGTT TTACATTCCG TTACCCTGAC CTTTCAAACG CACTTGGTGA TTTAATTAAG CACGGAAAGT AG
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Protein sequence | MNNHIVITGA TGVIGVELAQ KLIKRGEKVV LLARSPNAAQ QKIPGAAAYV RWDSDMQEGE WKSTISGAKA VIHLAGKPLL ESRWNEEHKQ ECYQSRIIGT RHIVAAIAEA AEKPQVFISS SAIGYYGSFD KCSDTAPLTE SGNKGSDFLA HICIDWEEEA RKAENLVPRL VFLRTGIVLS TRGGMLQKMM TPFQYFAGGP IGTGLQCISW IHMDDEVNAI IASLDNSAYK GAINLVAPTP VSMKEFASKL GAVMGRPSLL QVPEFAVKML MGEGGEYAVR GQKVLPTFLE KQGFTFRYPD LSNALGDLIK HGK
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