Gene Syncc9902_2195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2195 
Symbol 
ID3742980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp2104262 
End bp2107717 
Gene Length3456 bp 
Protein Length1151 aa 
Translation table11 
GC content49% 
IMG OID637772394 
Producthypothetical protein 
Protein accessionYP_378196 
Protein GI78185762 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.175885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGCCA GCACTTGCGT CGTTGCTGAA ACCGGTAATG CAAAAGAAGC CGAAAGTGTT 
TCTTATTTAA CACACGGCGC AACGAATGCA AATACTGATC AAATACAGCA CATAACAAGC
AGCCTCAAGG CACCTAGAGA CAACGAAACA AATCACCGAC GAAAACAAAC AAGCCCTCTC
GTTGCGACCA ATCACAACAT CAACGATGTT GACTGGCTGC AAGGCCTAAA TGAACAGATC
GCCTGGATCG AAGGTGATCC AATTCACGAA ATATCGAAAC AACTCAATCA GAATAAAAAA
GCAGGAAAAA CGATCGATGA GCTGCACATT GTTGCCCACG GCAGCAATGG TGAAGTCAAA
CTCGGAAATA CATTCCTCAC CAAACAATAT CTAGAAGAGT CTTCTCTTCT CCTACAGGAG
TGGAAAGTTG AAGCCATTTA TTTATGGAGC TGCGAAGCAG GACGCAACAC AGAACTCATC
AAAACGCTGG GCAAAATCAC GGGAGCTGAT GTTTACACAA GCAAAAGCGA GATCAACAGC
AAGCAACCCA ACCTTTCATC CAGCACAGGA AAAGAGGCAT CACTTGAGGC ACTGATTGGC
ATAGCAAGGC TCAATCGATG GAGCGGGGCG CTGGCAAGCA CACAAGTTCT TGATGCCAAC
TTTCAACAAC TGAATTTCGA TCACAACAAT TACAACACAT CCTTCAATAA TCCGTACGGA
AGCGCAACAG CAGGAGATGT AGTCCTATTT AAAAATGTAA TCACAATCGG CGGTCAAGTC
GTCGACGCTC TTTACACAGT AGGCAGCATT AGCTCAGACA TAGGCATAAC TTTTGTCGAC
TATGGAGGAC TTGATGCTAC ATACATTTCC AGCTATTTCC CTACATCTTC AACTTCAGAC
CACCTGATTG AAGCTACAAT TAGTTTTTAC GAAGGCGGTA CATTTACAGG CTCCGGAACA
GGTAACAGAG TCACCCTTGA GAACGTTGCA CTCAACACAT ATGACATCGA TCTGAAGCAG
TTTCAAGTAT TTAAGGATTT TAATTCCTAC GAATTAGCCG CCGGATCAAA TACAAATCTT
GACGTCACAG TACAAAGCGA CGGATCAGTC AAATTCCAAG ATACGTCGCT TGCAAATATC
AATCCTAATG GAACAGACGA TAGGGGCCGA GCTCGGGTTT ATTACGACGC AATTGATACA
TTTGAGATTG CCATGGGCAC ACCTCTTAAT ACCAACGTAG TATTTTTCTT AGACTTTAGT
GTTGGACCCT CCTGGACAGG GGACACCACA ACAACAGATA CTCCAGCAGC AAACTTCACC
TGGAGCACCC GCAATTTAAC TGAAGCGTCA GCAAATGTTG GCTCATTTAC TGAAACAGCC
ACCATTACCT TTAACCATCC AGGGTCAACG ATTTTCGCTG GATCCAATGG CGACACTATC
ACTCATAGTG CGACAAATGT TCCAGCAGGA CTGACCACTG TTGTTACACG CGCATCCGAC
ACAACAGCAA CGATCACGGT CACCGGGAAT GCTACTAACC ACACGACATC CGATGACTTA
AGCAACATCG AGCTGGAATT TGAGAACAGC GCATTTGTTG TTGGTTCTGT AGGAGCTAGT
TCAATTACCG ATGCACGAAT CACCAATTTC GGCCTGAGCT TTATTGATGA CACAACTCGG
CCCACCATCG CCATCACCGA TGACGATGCC GATAACTCCT TAAGCGCTGG TGAGTCATCC
ACACTCACCT TCACCCTCTC AGAAGCATCC ACTAATTTCG TTGAAGCCGA CGCCACTGTT
ACCGGTGGGG CCCTTTCCAA CTGGACCGCT GTTTCCAGCA CCGTTTACAC CGCCACTTTT
ACGCCCACAG CAGACAGCAC CACCAACGGC GTCATTCACG TCGCTAACGA TAAATTCTCT
GATGCTGCCA GCAACACCAA CCAAGACGAA GACGACGCCA ACAACACCGT CACCTTCACC
GTTGATACCA CCCGGCCCAC CATTGCCATC ACCGATGACG ATGCCGATAA CTCCTTAAGT
GCTGGTGAGT CATCCACACT CACCTTCACC CTTTCAGAAG CATCCACTGA TTTCGTTGAA
GCCGACGCCA CTGTTACCGG CGGCGAACTC TCCAACTGGA CTGCTGTTTC AAGCACCGTT
TACACCGCCA CTTTTACACC CACAGCAGAC AGCACCACCA ACGGCGTCAT TCACGTCGCT
AACGACAAAT TCTCTGATGC TGCCAGCAAC ACCAACCAAG ACGAAGACGA CGCCAACAAC
ACCGTCACCT TCACCGTTGA TACCACCACA ACTCCTTCTC CTTCGCCTTC TCCTTCGCCT
TCGCCTTCTC CATCGCCATC CCCTTCGCCG ACTCCTTCTC CCTCAGCGAC GCCGACTGCT
GAAATTGAAT CAGCATCAGA GAGCGCAGGA GATGTTTATC TCCTCCTCGA TACCTCCACG
TCCATGCGCC ACAGCGAGGG TAAAGATCAC AGCAAATTCC AATGCCTGTT AGCCCTTGAA
GCATTCGCAC AAGATGCCGA ACGCGCTGGC TATCAGTTTC AACGCCGCGA CACCAACAGC
ACCATCACAT CGACGCAATT ACTCCAAACC CTGGCCAATC AAACCAGCAC ACAAGCAATT
CAAGAGCTGG ATAATTACAC CATCATTGAT AACCCAAATG ATTCAAATAC TGCCGATGAT
CTCAACATTA ATCTGATTAC TTACGACTAC CACGTCCAAC ACAACACCTT CATCCTTTCC
CCCACAAATC CCAGCAGCGG CATCGATACA ATGCAATCGA TCCTGTCGCT CAAAATGGCA
GGGCAAGTGC ATGGAAATTC AATAAAAAAC AACTCCAAAT GGAAAGAACT TGGCCTGCCT
GATCCCAATC GGTTTGACCT CCACAAAGGC CGTTCGGACA GGCCTTCCAA CCTCTATGCC
GGCACAGAAT TACTCGGCGC CTTGGAAGGG CTCAACTATC TCCTCAACAA CAAAGCCAAC
GACACCAGCC GGCGCGATCA ATCCACCAAA ATCTCCCTCA TTCTCGATGG CAGGCCAGAA
CGACGCAGCT GGTGGGACAC CAGAACGAAC TCCGCTTCTG ACTCCATCAC CGGCCAGGCC
ATTCCGCTGC CCGAAAGCCT CGGCAAAGAA GACATCACCA CATCAGGCCT GCTCTACGAC
AACAAGGGCA ACCCGCATTT TTTCAAGAAT AATCAGGGCC AATGGCAGTG GAAGGCGATG
CAAAACGATC TCAATGCCGC CCTCGATCGC CTAGCCACTT ACTCAACAGA TCCCACCACG
ATCCAGGTGA ATGCCTATGG CCTGAACAAC ACCGACAGCA CCTCCCTCAA CGCCACTTAT
CAAGACCTCT TCTCCAACCA AAGCTTCGAC AACTCGTCCA GCAGCTGGAG TTACGCCCAC
CAAATCATCA ACTCGCTGGG AGATATCAAC TTCTAA
 
Protein sequence
MPASTCVVAE TGNAKEAESV SYLTHGATNA NTDQIQHITS SLKAPRDNET NHRRKQTSPL 
VATNHNINDV DWLQGLNEQI AWIEGDPIHE ISKQLNQNKK AGKTIDELHI VAHGSNGEVK
LGNTFLTKQY LEESSLLLQE WKVEAIYLWS CEAGRNTELI KTLGKITGAD VYTSKSEINS
KQPNLSSSTG KEASLEALIG IARLNRWSGA LASTQVLDAN FQQLNFDHNN YNTSFNNPYG
SATAGDVVLF KNVITIGGQV VDALYTVGSI SSDIGITFVD YGGLDATYIS SYFPTSSTSD
HLIEATISFY EGGTFTGSGT GNRVTLENVA LNTYDIDLKQ FQVFKDFNSY ELAAGSNTNL
DVTVQSDGSV KFQDTSLANI NPNGTDDRGR ARVYYDAIDT FEIAMGTPLN TNVVFFLDFS
VGPSWTGDTT TTDTPAANFT WSTRNLTEAS ANVGSFTETA TITFNHPGST IFAGSNGDTI
THSATNVPAG LTTVVTRASD TTATITVTGN ATNHTTSDDL SNIELEFENS AFVVGSVGAS
SITDARITNF GLSFIDDTTR PTIAITDDDA DNSLSAGESS TLTFTLSEAS TNFVEADATV
TGGALSNWTA VSSTVYTATF TPTADSTTNG VIHVANDKFS DAASNTNQDE DDANNTVTFT
VDTTRPTIAI TDDDADNSLS AGESSTLTFT LSEASTDFVE ADATVTGGEL SNWTAVSSTV
YTATFTPTAD STTNGVIHVA NDKFSDAASN TNQDEDDANN TVTFTVDTTT TPSPSPSPSP
SPSPSPSPSP TPSPSATPTA EIESASESAG DVYLLLDTST SMRHSEGKDH SKFQCLLALE
AFAQDAERAG YQFQRRDTNS TITSTQLLQT LANQTSTQAI QELDNYTIID NPNDSNTADD
LNINLITYDY HVQHNTFILS PTNPSSGIDT MQSILSLKMA GQVHGNSIKN NSKWKELGLP
DPNRFDLHKG RSDRPSNLYA GTELLGALEG LNYLLNNKAN DTSRRDQSTK ISLILDGRPE
RRSWWDTRTN SASDSITGQA IPLPESLGKE DITTSGLLYD NKGNPHFFKN NQGQWQWKAM
QNDLNAALDR LATYSTDPTT IQVNAYGLNN TDSTSLNATY QDLFSNQSFD NSSSSWSYAH
QIINSLGDIN F