Gene Syncc9902_2107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2107 
Symbol 
ID3742109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp2010546 
End bp2011283 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content61% 
IMG OID637772305 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_378108 
Protein GI78185674 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACG CCCAAACCCC CCCTAGTGAA GAGCAAGAAG CACCGCCCCC GGCGCCAAGG 
TTGCTTCTGG TAGACGACGA GCCCGGGTTG CGCACGGCGG TCCAGGCATA CCTCGAGGAT
GAGGGTTTTG ATGTCACCAC CGCGGTGGAT GGGGAGGAAG GATTCACGAA GGCGCAGCAG
ATGTTGCCCG ATGTGGTGAT TAGCGACGTG ATGATGCCTC GGCTGGATGG TTACGGCCTA
TTGAAGAAAT TGCGAGACGA CGAACGGCTC GGCGGCACCC CCGTGATTTT CTTAACGGCG
AAAGGCATGA CGGCTGATCG CACCCAGGGC TACATGGCTG GGGTGGACGA CTACATCCCG
AAGCCGTTCG ATCCCGATGA GCTGGTGGCG CGGGTGCGCA ATGTGGCGCA ACGCCAGCAG
CGGCTTTTGC AGGAGGCAGC GCGCTTCGCG GATACGGATA TGGGGCAGAT GGCCAAGCAG
ATCACAGAGA TTCGCTCTTT GTTGGCCCAA GCTGAGGCCT TGCCTTCCAA GGATCCGGTG
GCGCACAGCT TCACGCCGCG GGAAGCAAGC GTGCTGCAGT TGGTGGCGGA GGGCTTGATG
AACAAGGAGA TCGCCCGTCA GCTGGAAACG TCGATCCGCA ATGTCGAGAA GTACGTCAGC
CGTTTGTTCA ACAAGACGGG CACGTCCAGT CGCACGGAAC TGGTGCGCTA CGCCTTGGAA
CACCGGCTGG TGACTTGA
 
Protein sequence
MSDAQTPPSE EQEAPPPAPR LLLVDDEPGL RTAVQAYLED EGFDVTTAVD GEEGFTKAQQ 
MLPDVVISDV MMPRLDGYGL LKKLRDDERL GGTPVIFLTA KGMTADRTQG YMAGVDDYIP
KPFDPDELVA RVRNVAQRQQ RLLQEAARFA DTDMGQMAKQ ITEIRSLLAQ AEALPSKDPV
AHSFTPREAS VLQLVAEGLM NKEIARQLET SIRNVEKYVS RLFNKTGTSS RTELVRYALE
HRLVT