Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_2107 |
Symbol | |
ID | 3742109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 2010546 |
End bp | 2011283 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637772305 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_378108 |
Protein GI | 78185674 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGACG CCCAAACCCC CCCTAGTGAA GAGCAAGAAG CACCGCCCCC GGCGCCAAGG TTGCTTCTGG TAGACGACGA GCCCGGGTTG CGCACGGCGG TCCAGGCATA CCTCGAGGAT GAGGGTTTTG ATGTCACCAC CGCGGTGGAT GGGGAGGAAG GATTCACGAA GGCGCAGCAG ATGTTGCCCG ATGTGGTGAT TAGCGACGTG ATGATGCCTC GGCTGGATGG TTACGGCCTA TTGAAGAAAT TGCGAGACGA CGAACGGCTC GGCGGCACCC CCGTGATTTT CTTAACGGCG AAAGGCATGA CGGCTGATCG CACCCAGGGC TACATGGCTG GGGTGGACGA CTACATCCCG AAGCCGTTCG ATCCCGATGA GCTGGTGGCG CGGGTGCGCA ATGTGGCGCA ACGCCAGCAG CGGCTTTTGC AGGAGGCAGC GCGCTTCGCG GATACGGATA TGGGGCAGAT GGCCAAGCAG ATCACAGAGA TTCGCTCTTT GTTGGCCCAA GCTGAGGCCT TGCCTTCCAA GGATCCGGTG GCGCACAGCT TCACGCCGCG GGAAGCAAGC GTGCTGCAGT TGGTGGCGGA GGGCTTGATG AACAAGGAGA TCGCCCGTCA GCTGGAAACG TCGATCCGCA ATGTCGAGAA GTACGTCAGC CGTTTGTTCA ACAAGACGGG CACGTCCAGT CGCACGGAAC TGGTGCGCTA CGCCTTGGAA CACCGGCTGG TGACTTGA
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Protein sequence | MSDAQTPPSE EQEAPPPAPR LLLVDDEPGL RTAVQAYLED EGFDVTTAVD GEEGFTKAQQ MLPDVVISDV MMPRLDGYGL LKKLRDDERL GGTPVIFLTA KGMTADRTQG YMAGVDDYIP KPFDPDELVA RVRNVAQRQQ RLLQEAARFA DTDMGQMAKQ ITEIRSLLAQ AEALPSKDPV AHSFTPREAS VLQLVAEGLM NKEIARQLET SIRNVEKYVS RLFNKTGTSS RTELVRYALE HRLVT
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