| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_2036 |
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| Symbol | |
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| ID | 3742996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | + |
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| Start bp | 1945429 |
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| End bp | 1946508 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637772233 |
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| Product | photosystem II reaction centre protein PsbA/D1 |
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| Protein accession | YP_378037 |
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| Protein GI | 78185603 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01151] photosystem II, DI subunit (also called Q(B)) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACCA CCATCCAGCA GCGCTCCGGC GCTTCTAGCT GGCAGTCCTT CTGCGAGTGG
GTCACCTCCA CCAACAACCG TCTGTATGTC GGTTGGTTCG GTGTGCTGAT GATCCCAACT
CTGTTGGCTG CCACCATCTG CTTCGTCATC GCATTCGTCG CCGCTCCTCC GGTTGACATC
GATGGCATCC GCGAGCCTGT CGCTGGCTCC TTGATGTACG GCAACAACAT CATCTCTGGT
GCTGTTGTTC CTTCCAGCAA CGCCATTGGC TTGCACTTCT ATCCCATCTG GGAAGCAGCT
TCACTCGACG AGTGGCTGTA CAACGGCGGT CCTTTCCAGC TCGTCGTCTT CCACTTCCTC
ATCGGCATCT ACGCCTACAT GGGTCGTGAG TGGGAACTCT CTTACCGCTT GGGCATGCGC
CCTTGGATCT GTGTTGCATA CAGCGCACCT GTCGCTGCTG CATCTGCAGT CTTCCTCGTC
TACCCCTTCG GTCAGGGTTC GTTCTCTGAT GCAATGCCCC TGGGCATCTC TGGAACCTTC
AACTACATGT TGGTGTTCCA GGCTGAGCAC AACATCCTGA TGCACCCCTT CCACATGCTG
GGTGTTGCAG GCGTCTTCGG CGGCAGCTTG TTCTCCGCCA TGCACGGCTC ACTGGTGACC
TCCTCCTTGG TGCGTGAAAC CACCGAAAGC GAGTCCCAGA ACTACGGCTA CAAATTCGGC
CAAGAAGAAG AGACGTACAA CATCGTGGCT GCTCACGGCT ACTTCGGTCG CCTGATCTTC
CAATACGCCT CCTTCAACAA CAGCCGTAGC CTCCACTTCT TCCTGGCTGC CTGGCCCGTT
GTCGGCATCT GGTTCACCGC CCTTGGCGTG TCAACCATGG CCTTCAACCT GAACGGCTTC
AACTTCAACC AGTCCATCCT TGATGGTCAG GGCCGCGTCC TGAACACCTG GGCCGACGTG
TTGAACCGTG CAGGCCTCGG CATGGAAGTC ATGCACGAGC GCAACGCTCA CAACTTCCCC
CTCGACCTGG CAGCTGCTGA GTCCACACCT GTGGCACTGC AAGCACCTGC AATCGGTTGA
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| Protein sequence | MTTTIQQRSG ASSWQSFCEW VTSTNNRLYV GWFGVLMIPT LLAATICFVI AFVAAPPVDI
DGIREPVAGS LMYGNNIISG AVVPSSNAIG LHFYPIWEAA SLDEWLYNGG PFQLVVFHFL
IGIYAYMGRE WELSYRLGMR PWICVAYSAP VAAASAVFLV YPFGQGSFSD AMPLGISGTF
NYMLVFQAEH NILMHPFHML GVAGVFGGSL FSAMHGSLVT SSLVRETTES ESQNYGYKFG
QEEETYNIVA AHGYFGRLIF QYASFNNSRS LHFFLAAWPV VGIWFTALGV STMAFNLNGF
NFNQSILDGQ GRVLNTWADV LNRAGLGMEV MHERNAHNFP LDLAAAESTP VALQAPAIG
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