Gene Syncc9902_2024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2024 
Symbol 
ID3742064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand+ 
Start bp1930840 
End bp1931493 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content55% 
IMG OID637772221 
Productpeptidase S16, lon-like 
Protein accessionYP_378025 
Protein GI78185591 
COG category[R] General function prediction only 
COG ID[COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.835929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACACGG CGTCCGTGTC TGATTATTCG GTCAGGGAAC TTCCCCTGTT CCCCCTGCCG 
GACGTCGTGT TGTTCCCACA ACAGCTTCTG CCCCTTCATA TTTTTGAATC GCGCTACCGG 
ATGTTGCTCC AATCTGTTTT GGAGTCCGAT AAGCGCTTCG GCATTGTCCG AATCGATCCT 
GAAACCGGCG AAATGGCCGA CATTGGCTGC TGCGCGGAAG TTCTTCAGCA CCAAACCAGT 
GAGGACGGAC GGAGCTACGT CGTAACCCTC GGGCAGCAAC GTTTTCGGTT GCTGAACATC 
ACTCGCGACA CGCCCTACAG AACGGCAATG GTGAGCTGGA TTGAAGATGG GCCAGTCGCA 
GACATGGAAT CGCTCACAAG CTTGAGAGAT CAAGTGAGTG GGGCGCTCAA CGACGTGGTG 
ACTCTGACGG CGAAGTTACA AAATCGAGAC GTTGAACTTC CCGACGACCT ACCCGACCTG 
CCCCGAGAAC TCTCCTTTTG GATTGGCGCC CATTTGGATA ATCGCGCTGC TGCTGAACAA 
CAAACCTTGC TCGAGCTCAC CGACACGCAC GACCGTCTTC ATCGACAGTT CGAAATGCTT 
GATCACACCC GGCGGCAACT GGCCGCACGC ACCGTTCTGA TGGACCTGAA GTAA
 
Protein sequence
MNTASVSDYS VRELPLFPLP DVVLFPQQLL PLHIFESRYR MLLQSVLESD KRFGIVRIDP 
ETGEMADIGC CAEVLQHQTS EDGRSYVVTL GQQRFRLLNI TRDTPYRTAM VSWIEDGPVA 
DMESLTSLRD QVSGALNDVV TLTAKLQNRD VELPDDLPDL PRELSFWIGA HLDNRAAAEQ 
QTLLELTDTH DRLHRQFEML DHTRRQLAAR TVLMDLK