Gene Syncc9902_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2019 
SymbolrpsL 
ID3742059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1926058 
End bp1926432 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content56% 
IMG OID637772216 
Product30S ribosomal protein S12 
Protein accessionYP_378020 
Protein GI78185586 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0048] Ribosomal protein S12 
TIGRFAM ID[TIGR00981] ribosomal protein S12, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAACCA TCCAACAGCT AATCCGCACT GAGCGCTCAC GTCTCAAAGT CAAGACGAAA 
TCGCCTGCTT TGAAGTCCTG CCCTGAGCGC CGCGGTGTCT GCACCCGCGT TTACACCTCC
ACGCCGAAAA AACCCAACTC GGCGCTTCGC AAGGTGGCTC GTGTGCGGCT CACCTCCGGT
TTTGAGGTGA CTGCTTATAT CGGTGGCATC GGACACAACC TTCAAGAGCA CTCTGTTGTG
CTGATTCGAG GAGGACGTGT CAAAGACCTG CCAGGGGTTC GATATCACAT CATTCGCGGA
ACCCTCGACA CATCTGGCGT CAAAGACCGC CGCCAATCCC GCTCCAAGTA CGGCGCTAAA
GCACCAAAAG AGTGA
 
Protein sequence
MPTIQQLIRT ERSRLKVKTK SPALKSCPER RGVCTRVYTS TPKKPNSALR KVARVRLTSG 
FEVTAYIGGI GHNLQEHSVV LIRGGRVKDL PGVRYHIIRG TLDTSGVKDR RQSRSKYGAK
APKE