Gene Syncc9902_2001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2001 
Symbol 
ID3743723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand- 
Start bp1907118 
End bp1907786 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content47% 
IMG OID637772198 
Productputative hydroxylase 
Protein accessionYP_378002 
Protein GI78185568 
COG category[S] Function unknown 
COG ID[COG3128] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.563142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTC TGACCTCGGA GCTTTTGGGC GTCGAGGAGA CGCTTCAGTT GACGAGTGAA 
CTCACCAACC GTGAGTCGAT TTGGCTTGAT GGCCGGCTTA CGGCTGGTGA GCATGCAGCC 
CTTGTTAAGC ACAATCGTCA ACTTGATCCC TCATTGCCTT TGGCACGATC GATTGCTGAG 
ATTGTTGAAC AAAAAATTAT TGACAGTCCT CTTTTGAAGA GCTTTGCACT GATTCGTAGG 
GTCCATAGCA TCCTGATTTC TCGAAGCGAA GTTGGAGACG GATATGGATG GCACGTGGAC 
AACCCATTTT CGAAGCATGG ACGTCGTGAT CTTTCTTTTA CCCTATTTCT CAGTGATCTC 
TCTGACTATG AAGGGGGGGA GCTTACATTT CAGCTTTTGC AGGGTTCGAA AGAAATTCGT 
CTTCCCGCTG GGCAGATTAT TCTTTATCCG AGCTCATCAT TGCATTGTGT CCAACCTATT 
TCAAGTGGTG TGAGATTGGT CTGTGTAGGT TGGATTGAAA GTTACATTCA ATCCACTGAA 
GATCGCTCAC TTTTATTTAA TTTAGATGCA GGGGCGAAAG GTTTGTTGGC TCGTCACGGA 
CGATCCGATG AACTCGACTT AATTTTTCAA GCGTATGCCA ATGCCGTCAG ACGCCTCTCT 
GGCCGCTAA
 
Protein sequence
MDFLTSELLG VEETLQLTSE LTNRESIWLD GRLTAGEHAA LVKHNRQLDP SLPLARSIAE 
IVEQKIIDSP LLKSFALIRR VHSILISRSE VGDGYGWHVD NPFSKHGRRD LSFTLFLSDL 
SDYEGGELTF QLLQGSKEIR LPAGQIILYP SSSLHCVQPI SSGVRLVCVG WIESYIQSTE 
DRSLLFNLDA GAKGLLARHG RSDELDLIFQ AYANAVRRLS GR