Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1986 |
Symbol | alr |
ID | 3741831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 1886567 |
End bp | 1887694 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637772182 |
Product | alanine racemase |
Protein accession | YP_377987 |
Protein GI | 78185553 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.371384 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGATC AAAATCCACG CCAGCGTGCC TGGGTGGAGG TATCACCGGC AGCGATTAAG GCCAATGCGA GCGCGTTGTG CCAGCACTTG ACCCCGGGTA CTGAACTCAT GGCCGTGGTG AAGGCCGACG GCTACGGCCA TGGGGCTGTC TCCGTGGCCA ACGCAGCCCT TGATGGAGGA GCTGCCAGTC TTGGCGTCGC CACGCTGCAG GAAGGATTAG AGCTCAGACG TGCAGGCCTC AAAGCCCCAA TCCTTCTCCT CAGCAATCTC TGCGACCCCG AAGACTTGCG GACCTGCCTG GAGTGGCAGC TCATGCCAAC CCTCAGCAGC CTTGCTGACG CCAAGCTTTG CCATGCCCTG GCAGAAGACA GCGGTCGACG CTTCAAGGTT CAGCTCAAAA TTGACACGGG CATGAGCAGG CTTGGGTGCG CACTCGACGA TGGTGCAGAA ACCACTCAAG CCATCCAACA CCTCAAAAAC TTAGAGCTGA AGGGGATTTA CAGCCATCTG GCCTGCGCAG ATGATCGCAG TACCACCGTG ACGCAACAGC AGCGGCAACG CTTCCAGTCC GTGATCGAGA CCCTCCCCCA AAGAGGCGTT GGGCTCTGCC GTCATCTCGC CAACTCGGCG GGAACCTTGT TGGAACCGAA CTTGCATTAC GACCTAGTAA GGGTGGGACT GGCCCTGTAC GGCCATGCAC CCGCCGATCA TTTGAGGGAT ATCGTGCCCT TGCGATCCGC ACTATCGGTG CGCGCCAAGG TGACTCTGAT CCGCGAGATC AAAGCCGGTA CTGGCGTGAG CTACGGGCAT CAGTACATCA GCCCCAATGC CAGACGCCTT GCTGTCGTCG CCATCGGCTA TGCCGACGGT GTTTTGCGAT CCCTCAGTGG GCAGATCGAT GTGCTCCATC GAGACAAACG GCTCCCACAA GTGGGCGCGA TCACCATGGA TCAGCTCTTG ATCGATGCAA CCGACGCAAC CGACCTTCAT CCCGGCAGCA TCGTGACCCT TCTGGGACGA GATCAAAGCG TTGAAATCAC CCCGCAGAGC TGGAGTGACC GCTGCCAGTC GATCCCTTGG GAAATTCTCT GCGGGTTCAA ACATCGGCTG CCCCGCGTTG AGGTCTGA
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Protein sequence | MSDQNPRQRA WVEVSPAAIK ANASALCQHL TPGTELMAVV KADGYGHGAV SVANAALDGG AASLGVATLQ EGLELRRAGL KAPILLLSNL CDPEDLRTCL EWQLMPTLSS LADAKLCHAL AEDSGRRFKV QLKIDTGMSR LGCALDDGAE TTQAIQHLKN LELKGIYSHL ACADDRSTTV TQQQRQRFQS VIETLPQRGV GLCRHLANSA GTLLEPNLHY DLVRVGLALY GHAPADHLRD IVPLRSALSV RAKVTLIREI KAGTGVSYGH QYISPNARRL AVVAIGYADG VLRSLSGQID VLHRDKRLPQ VGAITMDQLL IDATDATDLH PGSIVTLLGR DQSVEITPQS WSDRCQSIPW EILCGFKHRL PRVEV
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