Gene Syncc9902_1986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1986 
Symbolalr 
ID3741831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1886567 
End bp1887694 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content59% 
IMG OID637772182 
Productalanine racemase 
Protein accessionYP_377987 
Protein GI78185553 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0787] Alanine racemase 
TIGRFAM ID[TIGR00492] alanine racemase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.371384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGATC AAAATCCACG CCAGCGTGCC TGGGTGGAGG TATCACCGGC AGCGATTAAG 
GCCAATGCGA GCGCGTTGTG CCAGCACTTG ACCCCGGGTA CTGAACTCAT GGCCGTGGTG
AAGGCCGACG GCTACGGCCA TGGGGCTGTC TCCGTGGCCA ACGCAGCCCT TGATGGAGGA
GCTGCCAGTC TTGGCGTCGC CACGCTGCAG GAAGGATTAG AGCTCAGACG TGCAGGCCTC
AAAGCCCCAA TCCTTCTCCT CAGCAATCTC TGCGACCCCG AAGACTTGCG GACCTGCCTG
GAGTGGCAGC TCATGCCAAC CCTCAGCAGC CTTGCTGACG CCAAGCTTTG CCATGCCCTG
GCAGAAGACA GCGGTCGACG CTTCAAGGTT CAGCTCAAAA TTGACACGGG CATGAGCAGG
CTTGGGTGCG CACTCGACGA TGGTGCAGAA ACCACTCAAG CCATCCAACA CCTCAAAAAC
TTAGAGCTGA AGGGGATTTA CAGCCATCTG GCCTGCGCAG ATGATCGCAG TACCACCGTG
ACGCAACAGC AGCGGCAACG CTTCCAGTCC GTGATCGAGA CCCTCCCCCA AAGAGGCGTT
GGGCTCTGCC GTCATCTCGC CAACTCGGCG GGAACCTTGT TGGAACCGAA CTTGCATTAC
GACCTAGTAA GGGTGGGACT GGCCCTGTAC GGCCATGCAC CCGCCGATCA TTTGAGGGAT
ATCGTGCCCT TGCGATCCGC ACTATCGGTG CGCGCCAAGG TGACTCTGAT CCGCGAGATC
AAAGCCGGTA CTGGCGTGAG CTACGGGCAT CAGTACATCA GCCCCAATGC CAGACGCCTT
GCTGTCGTCG CCATCGGCTA TGCCGACGGT GTTTTGCGAT CCCTCAGTGG GCAGATCGAT
GTGCTCCATC GAGACAAACG GCTCCCACAA GTGGGCGCGA TCACCATGGA TCAGCTCTTG
ATCGATGCAA CCGACGCAAC CGACCTTCAT CCCGGCAGCA TCGTGACCCT TCTGGGACGA
GATCAAAGCG TTGAAATCAC CCCGCAGAGC TGGAGTGACC GCTGCCAGTC GATCCCTTGG
GAAATTCTCT GCGGGTTCAA ACATCGGCTG CCCCGCGTTG AGGTCTGA
 
Protein sequence
MSDQNPRQRA WVEVSPAAIK ANASALCQHL TPGTELMAVV KADGYGHGAV SVANAALDGG 
AASLGVATLQ EGLELRRAGL KAPILLLSNL CDPEDLRTCL EWQLMPTLSS LADAKLCHAL
AEDSGRRFKV QLKIDTGMSR LGCALDDGAE TTQAIQHLKN LELKGIYSHL ACADDRSTTV
TQQQRQRFQS VIETLPQRGV GLCRHLANSA GTLLEPNLHY DLVRVGLALY GHAPADHLRD
IVPLRSALSV RAKVTLIREI KAGTGVSYGH QYISPNARRL AVVAIGYADG VLRSLSGQID
VLHRDKRLPQ VGAITMDQLL IDATDATDLH PGSIVTLLGR DQSVEITPQS WSDRCQSIPW
EILCGFKHRL PRVEV