| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1958 |
|---|
| Symbol | rplB |
|---|
| ID | 3742234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 1871132 |
|---|
| End bp | 1871995 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637772154 |
|---|
| Product | 50S ribosomal protein L2 |
|---|
| Protein accession | YP_377959 |
|---|
| Protein GI | 78185525 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0090] Ribosomal protein L2 |
|---|
| TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATCC GTAAATTCCG CCCCTACACC CCCGGTACAC GCACCCGCGT CGTCACCGAC
TTCAGTGAGG TCACCGGCCG CAAGCCGGAG AAGACCCTTG TGGTGTCCAA GCACCGCAAA
AAAGGCCGCA ACAACCGTGG CGTCATTACT TGCCGCCACC GAGGCGGTGG TCATAAGCGG
TTGTACCGCC TCGTGGATTT CCGCCGCAAC AAGCACGGCG TAACCGCGAA GGTGGCTGCG
ATCCACTACG ACCCCCATCG CAATGCGCGA TTGGCCTTGC TCTTTTACTC CGATGGTGAA
AAGCGCTACA TCCTCGCTCC AGCAGGAGTT CAGGTAGGTC AAACCGTTGT GTCTGGGCCA
GAGGTTCCGA TCGAAAACGG CAACGCCATG CCGCTTTCAT CCGTACCTCT TGGTTCGAGC
GTTCACTGCG TCGAGCTTTA TGCCGGTCGC GGTGGACAGA TGGTTCGAAC CGCTGGAGCT
AGTGCTCAGG TGATGGCCAA AGAAGGCGAC TATGTCGCTC TCAAACTGCC TTCCACCGAA
GTTCGGTTGG TACGGCGTGA GTGCTACGCA ACCCTTGGCG AAGTGGGCAA CTCTGAAGTT
CGCAACACAA GCCTCGGCAA AGCTGGTCGG CGTCGTTGGC TCGGACGGCG GCCTCAAGTG
CGAGGCAGTG TGATGAACCC TTGCGACCAC CCTCACGGTG GTGGTGAGGG CCGAGCACCG
ATCGGTCGCT CCGGTCCTGT GACGCCTTGG GGCAAACCCG CCCTCGGTCT TAAGACCCGC
AAGCGGAATA AACCCAGCAA CCAATATGTG CTCCGGAAAC GTCGCAAGAC GTCCAAGCGG
AGCCGTGGCG GACGCGATTC CTGA
|
|---|
| Protein sequence | MAIRKFRPYT PGTRTRVVTD FSEVTGRKPE KTLVVSKHRK KGRNNRGVIT CRHRGGGHKR
LYRLVDFRRN KHGVTAKVAA IHYDPHRNAR LALLFYSDGE KRYILAPAGV QVGQTVVSGP
EVPIENGNAM PLSSVPLGSS VHCVELYAGR GGQMVRTAGA SAQVMAKEGD YVALKLPSTE
VRLVRRECYA TLGEVGNSEV RNTSLGKAGR RRWLGRRPQV RGSVMNPCDH PHGGGEGRAP
IGRSGPVTPW GKPALGLKTR KRNKPSNQYV LRKRRKTSKR SRGGRDS
|
|---|
| |