Gene Syncc9902_1955 details

Gene Information

• Locus tag: Syncc9902_1955
• Symbol: rplC
• ID: 3742231
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Synechococcus sp. CC9902
• Kingdom: Bacteria
• Replicon accession: NC_007513
• Strand: +
• Start bp: 1869530
• End bp: 1870186
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637772151
• Product: 50S ribosomal protein L3
• Protein accession: YP_377956
• Protein GI: 78185522
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAATCG GCATTCTCGG GAAGAAGCTG GGCATGTCCC AGCTCTTCGA CGAGCAGGGC 
AGAGCGGTCC CCGTCACTTT GATCGAGGCC GGTCCCTGCC GCATCACACA ACTCAAAAAC 
GATGACACCG ATGGCTATGC CGCGGTGCAG ATCGGTTTCG GCGAAACCCG CGAGAAATTG 
ATCAACAAGC CTTCCAAAGG CCATCTCACC AAATCCGGCG AGGATCTTTT GCGCCACCTG 
CGCGAGTACC GCGTCGACAA CGTCGACGGA CTTGAACTTG GTGGGTCCAT CACGGTCAGC 
GACTTTGAAG CTGGTCAAAA AGTGGATGTA AGCGGCGACA CCATGGGTCG CGGTTTTGCA 
GGTCTTCAGA AACGCCACGG TTTCAGCCGC GGCCCGATGA CCCACGGTTC TAAAAACCAC 
CGGCAACCGG GCTCCATCGG TGCTGGCACA ACGCCAGGGC GGATCTACCC CGGTAAGCGG 
ATGTCTGGCC GTTATGGCGG CAAGAAAACG ACGACCCGCG GTTTGACCAT CTTGCGCATC 
GATAGCGACC GCAACTTGCT GGTTGTTAAA GGTTCCGTGC CTGGCAAACC AGGCGCACTT 
CTGAACATCA AGCCAGCTGT GCGTGTGGGT GCAAAACCCG CCAAAGGAGG TAAGTGA 

 

Protein sequence

MSIGILGKKL GMSQLFDEQG RAVPVTLIEA GPCRITQLKN DDTDGYAAVQ IGFGETREKL 
INKPSKGHLT KSGEDLLRHL REYRVDNVDG LELGGSITVS DFEAGQKVDV SGDTMGRGFA 
GLQKRHGFSR GPMTHGSKNH RQPGSIGAGT TPGRIYPGKR MSGRYGGKKT TTRGLTILRI 
DSDRNLLVVK GSVPGKPGAL LNIKPAVRVG AKPAKGGK