Gene Syncc9902_1940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1940 
Symbol 
ID3741999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1856231 
End bp1857397 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content53% 
IMG OID637772135 
Productrhodanese-like protein 
Protein accessionYP_377941 
Protein GI78185506 
COG category[P] Inorganic ion transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.865805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCCAA GTCATCCCAC CCCAAATCAG AGCCTGTCCT CTGATGAGCG GGGGCGTTAC 
GCCCGACATC TCATTCTTCC GGAAGTTGGC CTTGCTGGTC AGGAGCGGCT TAAGGCTGCA
GCAGTGCTCT GTGTTGGCGC AGGAGGTTTG GGCTCCCCCC TTCTCCTTTA TTTAGCTGCA
GCAGGGGTTG GTCGTATTGG CATCGTTGAT GGAGATGCTG TTGAGCTCTC GAATCTGCAG
CGTCAAGTGA TTCATCGCTC CGATGCTGTC GGTCGCTCTA AAGCCAGATC TGCCGCAGAG
AGTGTTCATG CGCTCAACCC TCATTGCCAG ATTGATGTGC ACGACGTGAT GCTTGATATC
ACCAATGTGA TGGATCTGAT CGCGGACTAC GACGTTGTCT GCGACGGAAC CGACAATTTC
GCCAGCCGAT ACTTAATCAA TGACGCCTGT GTGTTGTCAG ATAAGCCATT GATTTATGGC
TCTGTTCAAC GCTTTGAAGG TCAGGTCACT GTTTTCAATT GCAATCCTGA AAGTCCTAAT
TTCCGCGATT TGTTGCCTGT TCCCCCTTCG CCTGGTGCGA TCCCCTCATG CTCAGAGGCA
GGGGTGATGG GTGTGATGCC GGGTTTGATT GGCCTCCTTC AGGCCACTGA AACGATCAAG
TTGATCACTG GCATTGGTCG TTGCCTCGAT GGCCGTTTGC TGGTGGTGGA TGCTCTATCT
ATGCGTTTTC GAGAACTCAC GCTGCGGCGG GATCTTGATC GTGCTCCGAT CAAGGACCTG
ATTGACTACT CGCAGTTCTG TAGTGCAGCC ACAACTGAGA TGGATCCTTC TGTGATGGAA
ACGATCAGTG TTACTGAGCT CAAGGCTCTT CTTGAAGGAG ATGCTGGGGA TTTGGCGCTT
GTTGATGTGC GTAACCCGGC TGAAGCAGAG ATTGTTGTGA TTCCTTCTGC GGTGCTGATT
CCGCTCTCCA CGATCGAAAG CGGAGAAGCG ATTGAGCAAG TCCGATCCTT GGCAGAAGGG
CGCCGTCTTT TTGTGCACTG CAAGTTAGGG ATGCGATCGG CGAAAGCCGC TCAACTGCTT
GCTGAGCATG GAATCTTCGC AATCAACGTG ACAGGAGGTA TTGACGCCTG GGCTCAAGAG
GTGGATCCAA CGTTGCCCCG TTACTAA
 
Protein sequence
MQPSHPTPNQ SLSSDERGRY ARHLILPEVG LAGQERLKAA AVLCVGAGGL GSPLLLYLAA 
AGVGRIGIVD GDAVELSNLQ RQVIHRSDAV GRSKARSAAE SVHALNPHCQ IDVHDVMLDI
TNVMDLIADY DVVCDGTDNF ASRYLINDAC VLSDKPLIYG SVQRFEGQVT VFNCNPESPN
FRDLLPVPPS PGAIPSCSEA GVMGVMPGLI GLLQATETIK LITGIGRCLD GRLLVVDALS
MRFRELTLRR DLDRAPIKDL IDYSQFCSAA TTEMDPSVME TISVTELKAL LEGDAGDLAL
VDVRNPAEAE IVVIPSAVLI PLSTIESGEA IEQVRSLAEG RRLFVHCKLG MRSAKAAQLL
AEHGIFAINV TGGIDAWAQE VDPTLPRY