| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1935 |
|---|
| Symbol | recF |
|---|
| ID | 3741994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 1851165 |
|---|
| End bp | 1852226 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637772130 |
|---|
| Product | recombination protein F |
|---|
| Protein accession | YP_377936 |
|---|
| Protein GI | 78185501 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00611] recF protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAGCTGA CCGAGTCGCG TTTGCTTGTG ATTGGCCCCA ACGGGATTGG TAAATCCAAC
CTTCTCGAAG CAGTGGAGCT ACTGGGCAGC CTGCGCTCCC ATCGCTGCAG CCAAGATCGC
GACCTGATCC AATGGGATAG CCCGATGGCC CTGTTGCGGG CAGACGTGGG CGATGGCGAC
CGCTTAGAAC TCGAATTGCG CCGGCGTGGG GGCCGCCAAG CTCGGCGAAA CGGAAAGGTA
CTAGATCGGC AACTGGATCT GATTGGCCCA CTGCGCTGTA TTGGCTTTAG TGCCCTTGAT
CTAGACCTCG TGCGCGGCGA ACCAGCCCTG CGCCGCCAAT GGCTCGATCG GGTGGTGCTG
CAGCTGGAAC CTGTTTATGC AGACCTCATC AGCCGGTACA ACCGATTACT ACGGCAAAGA
AGTCAGCTGT GGCGTAGCCA CCGACTCAAT ACAGCAGAAC GCAGTGGGCT CCTTGATGCC
TTCGACGTTC AAATGGCCCT GATCAGCACC CGCATTCATC GACGCCGACG CAGGGCTTTG
CAACGCCTTG AACCGATTGC CCAGCATTGG CAGTCGCATC TGAGCAGCGG GAAAGAACTC
CTACAGCTCC ACTATCAACC TGGAAGTCGG TTGGACGGTG AGGAGGCCGA AGAACCCTGG
CGATTAGCGA TTGAGGAACA ACTTCGCGAC CAACGGGAGG ACGAAGAACG TCTCGGGAAC
TGCCGGATCG GACCGCATCG CGATGAGATC AACATGGTGC TTGGGGAAAC CCCTGCCCGT
CGTTTTGGGT CAGCAGGCCA GCAGCGTTCA CTCGTCCTAG GCCTGAAGCT CGCCGAACTC
GAGTTAGTCA AGGAACTTTG TGGAGAACCA CCGCTCCTAC TCCTCGATGA CGTGCTCGCC
GAACTCGATC CAATCCGTCA ACAACTTCTT TTAGAAGCCG TCGGAAATGA CCACCAATGC
CTGATTAGTG CCACCCATCT CGATGGTTTT CATGGGGGCT GGCGTCAGGA GGCTCAGATT
CTTGGGGAAA ATGAACTCAA AGAAGCAATG AACGTCGGAT AG
|
|---|
| Protein sequence | MELTESRLLV IGPNGIGKSN LLEAVELLGS LRSHRCSQDR DLIQWDSPMA LLRADVGDGD
RLELELRRRG GRQARRNGKV LDRQLDLIGP LRCIGFSALD LDLVRGEPAL RRQWLDRVVL
QLEPVYADLI SRYNRLLRQR SQLWRSHRLN TAERSGLLDA FDVQMALIST RIHRRRRRAL
QRLEPIAQHW QSHLSSGKEL LQLHYQPGSR LDGEEAEEPW RLAIEEQLRD QREDEERLGN
CRIGPHRDEI NMVLGETPAR RFGSAGQQRS LVLGLKLAEL ELVKELCGEP PLLLLDDVLA
ELDPIRQQLL LEAVGNDHQC LISATHLDGF HGGWRQEAQI LGENELKEAM NVG
|
|---|
| |