| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1913 |
|---|
| Symbol | |
|---|
| ID | 3742756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 1829073 |
|---|
| End bp | 1829552 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637772108 |
|---|
| Product | protein tyrosine phosphatase |
|---|
| Protein accession | YP_377914 |
|---|
| Protein GI | 78185479 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0394] Protein-tyrosine-phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGA CAATTCTGTT CGTCTGCCTC GGGAACATTT GCCGATCTCC CGCAGCCGAG
GGGGTGTTCC TGCACTTACT CGCCGAGCGC AACCTCACCG ATCAATTTGT AGTGGATTCG
GCTGGAACAG GCGGATGGCA TGTGGGGAAC CCAGCAGATC GCCGCATGCA GGCAGCAGCC
AATCGCCGAG GGATTCAGTT ACCAAGTCGA GCCCGACAAA TCAGTCTTGA CGACCTGGTG
GATTTCGATC TCGTGCTCAC CATGGACGAT GCCAACTTGT CAGCGGTACG AAGTTTGTCC
GATGAGATGG GCGGCCGTGC CACAGCGGAG GTGAGGCCAA TGCTGAGTTT TTCTCGAAAC
TTCACTGAAC ACGAAGTACC AGACCCGTAC TACGGCGGTG AAGCGGGTTT CGAGCATGTC
CTCGACCTCC TCGAAGACTC CTGTTCTGCG TTACTTGATG AACTCACCGC TGGGGAGTAG
|
|---|
| Protein sequence | MTKTILFVCL GNICRSPAAE GVFLHLLAER NLTDQFVVDS AGTGGWHVGN PADRRMQAAA
NRRGIQLPSR ARQISLDDLV DFDLVLTMDD ANLSAVRSLS DEMGGRATAE VRPMLSFSRN
FTEHEVPDPY YGGEAGFEHV LDLLEDSCSA LLDELTAGE
|
|---|
| |