Gene Syncc9902_1867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1867 
Symbol 
ID3742180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1794371 
End bp1795474 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content55% 
IMG OID637772062 
Product30S ribosomal protein S1 
Protein accessionYP_377868 
Protein GI78185433 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0539] Ribosomal protein S1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.61448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCGA CGCCCACAGA AGAGCAAACC CCAGACACCA GCACAGCAAC ACCAGCAGTA 
GAAGCATCTG CCACCGCAGA AGCTGGTGCC TTAACAGCTG AGCAAGCCTT TGAAGCCGAA
GATCTCGGCA TTCCCGAAGA CGTTCCGACC GCTGACGATC CCAGCAGCAG AGCAAACCGG
AACAACCTCG AGGAAGCCGG TTTCACCATT GATGACTTCG CGGCCCTTCT AAGCAAGTAC
GACTACAACT TCAAGCCTGG CGACATCGTC AACGGCACTG TCTTCGCCCT GGAATCAAAG
GGCGCAATGA TCGACATCGG CGCCAAGACA GCCGCGTTCA TGCCCTTACA AGAGGTATCG
ATCAACAGGG TTGAGGGCCT GAGCGATGTG CTCCTGCCTG GTGAGATTCG TGAATTCTTC
ATCATGAGTG AAGAGAACGA AGATGGTCAG CTGGCGCTGT CGATCCGACG GATCGAATAT
CAACGTGCCT GGGAGCGTGT GCGCCAGCTT CAGAAAGAAG ATGCCACGAT TTACTCCGAG
GTGTTTGCCA CCAACCGTGG TGGTGCTCTG GTTCGGGTTG AGGGATTGCG TGGATTCATC
CCTGGCTCCC ACATCAGCAC GCGCAAGCCG AAAGAAGAGT TGGTTGCCGA CTTCCTCCCG
CTCAAATTTC TTGAAGTGGA TGAAGAGCGC AACCGCTTGG TCTTAAGCCA TCGCCGTGCT
CTGGTTGAGC GCAAGATGAA TCGCCTGGAA GTTGGCGAAG TGGTGGTTGG CACCGTCCGC
GGAATCAAGC CCTACGGAGC CTTCATCGAC ATCGGCGGTG TCAGTGGATT GCTGCACATC
TCTGAAATCA GCCATGAGCA CATTGAGACT CCTCACTCTG TGCTCAATGT GAACGATCAG
ATGAAGGTCA TGATCATCGA CCTGGACGCT GAACGAGGCC GTATTTCCCT CTCTACCAAA
GCACTGGAGC CCGAACCCGG TGACATGCTC ACCGATCCTC AGAAAGTGTT TGAAAAAGCT
GAGGAAATGG CAGCTCGGTA CAAGCAAATG CTTCAAGAGC AGGCTGAGGA AGGAGATGAG
CCCATCGCAT CAATGATGAT TTGA
 
Protein sequence
MAATPTEEQT PDTSTATPAV EASATAEAGA LTAEQAFEAE DLGIPEDVPT ADDPSSRANR 
NNLEEAGFTI DDFAALLSKY DYNFKPGDIV NGTVFALESK GAMIDIGAKT AAFMPLQEVS
INRVEGLSDV LLPGEIREFF IMSEENEDGQ LALSIRRIEY QRAWERVRQL QKEDATIYSE
VFATNRGGAL VRVEGLRGFI PGSHISTRKP KEELVADFLP LKFLEVDEER NRLVLSHRRA
LVERKMNRLE VGEVVVGTVR GIKPYGAFID IGGVSGLLHI SEISHEHIET PHSVLNVNDQ
MKVMIIDLDA ERGRISLSTK ALEPEPGDML TDPQKVFEKA EEMAARYKQM LQEQAEEGDE
PIASMMI