Gene Syncc9902_1861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1861 
Symbol 
ID3742174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1790213 
End bp1791061 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content58% 
IMG OID637772056 
Producthypothetical protein 
Protein accessionYP_377862 
Protein GI78185427 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAGGA ACCTGCTCAT TGCCGATTCG GGCAAGGGCC ATGTGGAAGA AATGATCCGC 
ATGCTGCAGG ACATCCCAAG CTTCAAAACT GCACGCGTCA ACCTGTTGCA CGTGGTGCCA
GAACAAAGCA AAGCCGGCTC CGAAGGACAC CGAGACAATG CGCAATCGAT GCTCGATGGC
GCTGCCAATC GCATGGGTCT TGATCCCAGC TCCGTTCAGA GCATCGTTCG CGATGGCGAC
ACCAAGCAAA CCGTGCTCAA AGTGGCCGAA GAGCTGAATG CTGACTTGAT CGTGATGGGA
TCACGGGGAC TGGGGCGCCT TCAATCGATC CTTGCCAACA GCACAAGCCA ATACGTCTTT
CAACTCTCAA CGCGGCCCAT GCTGCTCGTC AGAGATGACC TCTACGTTCG GCATGTCAAT
CGCGTGCTGG TAACCATTGA CGGGACTGGT GTGGGTGACG ACGCGCTAAG AACCGCCTGC
GAATTGGTGC GAGACATCCC AGGAGGAACG CTGACCGGCC TGCACGTGGT GCGGCAAGAA
TCAGCACCTT CGCGCGGAGG ACGTACGAAA GCAGATGAAA TCCTGGACGC TGCGGTTCAA
AGGGCACGCA GCTTTGGCGT CGACCTCAAA ACCGTTCACA CCGAAGGGAA AGATATCGGT
CGAAGCGTTT GCGCAGTCGC CGAAGACATC AATGCCGACA TGCTCGTGAT CGCGTCACAA
GATCGTCGAC CCCTCGTAGC GCGTGGACTC GTCGATCTTG ACAAGCTGCT CGGCGGATCC
GTGAGCGATT ACATCCGTGT TCACGCTCCC GCCCCAGTGC TGCTTGTTCG GGAACCGGAG
CGCGCGTAG
 
Protein sequence
MFRNLLIADS GKGHVEEMIR MLQDIPSFKT ARVNLLHVVP EQSKAGSEGH RDNAQSMLDG 
AANRMGLDPS SVQSIVRDGD TKQTVLKVAE ELNADLIVMG SRGLGRLQSI LANSTSQYVF
QLSTRPMLLV RDDLYVRHVN RVLVTIDGTG VGDDALRTAC ELVRDIPGGT LTGLHVVRQE
SAPSRGGRTK ADEILDAAVQ RARSFGVDLK TVHTEGKDIG RSVCAVAEDI NADMLVIASQ
DRRPLVARGL VDLDKLLGGS VSDYIRVHAP APVLLVREPE RA