Gene Syncc9902_1720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1720 
Symbol 
ID3742954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1657613 
End bp1658857 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content59% 
IMG OID637771912 
ProductCPA1 family Na+/H+ antiporter 
Protein accessionYP_377722 
Protein GI78185287 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCCTG AGCGGCTAGG TCTGCTGTGG GGAATCACCG TGTTCTCCGG GGCCGCGGCG 
CGTTTGGTGG CGGCCTTTTC CGGATTGCCT GGGGTGGTTT TGCTGTTGCT TTCAGGCCTC
TTGATTGGGC GGTCTGGACT GGGGCTTGTC GAACCCCTCG ATCTCGGCCC AGGCCTTGGG
ACGATCGTGG GATTACTGGT CAGCCTTGTG CTGTTCGACG GGGGAATGAA CCTCCGTCTT
CCGGGCGACA CGATTAAGGC AACCGTTCAG CGCATTGCTG TTTTGCGGTT GCTGATCTCG
CTTGGTGGCG GCTTGCTGGC GGCCCATTGG CTAGCGGGTC TGAGTTGGTC GGTGGCGGCT
GTGTTCAGTG CGATTGTTTT GGCCACAGGC CCAACCGTGG TCACCCCGTT GGTGCGCCAA
ATCCGCTTGG CCGCTCCCCT GGGGGATGTG CTGGAGGCCG AAGGTCTGCT GTTAGAGCCG
ATTGGGGCGG TTCTTGCGTT GCTTTTGCTG GAGTTAGTGC TCGGCAACCT TCATGGCTGG
AGGGAGCTGG CGATTGGTTT GCTGTCGCGG CTTGGTGGTG GAGTTTTATT TGGAGCGGGA
GTGGGTTGGC TGCTCTCGGA GGTGTTGCGT CGCCTCAAAC CTGAGCAATC CTCAGGTTTG
CCCTTGCAAT TGAGCTTGGG GATGCTGTTT CTGATGTACG GCGTCAGTGA ATGGCTGTTG
CCGGAATCAG CATTGCCCGC GTCCGTTGCG GCAGGAATCG TTGTGGGTCG TCGACCTGGC
TTTTACACAG CTGAATTTGA ACGTTTGATT CAAGAGCTGG CGCAGTTGTC GATCACGATG
CTCTTTCCCT TACTGGCGGC GGATGTGTCT TGGGCTGAGC TCAGTCCTTT GGGCTGGGGC
GGAATTCTTT GTGTTCTCAC GTTGATGTTT GTGGTGAGGC CTATCGGCGT TGGTGTTGCC
ACGATTGGGT TGCCATTGGA CCTCCAGCAA CGCTTGTTCC TTGGTTGGCT CGCACCCCGC
GGCATCGTTA CGGCTTCAGT GGCCTCGTTG TTCTCTATTC GTTTGGAACA AGCCGGCATT
CTTGGAGCCG GCCGCCTGCA GGGCTTGGTG TTCCTGACGA TTTTGATGAC TGTGGGCTTG
CAGGGGCTGA CCGCCCAGCC TTTGGCGCGG ATGCTGGGGT TGATCCAACA GGATTCAGAG
CCCGGCGAGG AGGAATCAGC TGAGGCAGCG CTGAAGGCGG GGTAA
 
Protein sequence
MTPERLGLLW GITVFSGAAA RLVAAFSGLP GVVLLLLSGL LIGRSGLGLV EPLDLGPGLG 
TIVGLLVSLV LFDGGMNLRL PGDTIKATVQ RIAVLRLLIS LGGGLLAAHW LAGLSWSVAA
VFSAIVLATG PTVVTPLVRQ IRLAAPLGDV LEAEGLLLEP IGAVLALLLL ELVLGNLHGW
RELAIGLLSR LGGGVLFGAG VGWLLSEVLR RLKPEQSSGL PLQLSLGMLF LMYGVSEWLL
PESALPASVA AGIVVGRRPG FYTAEFERLI QELAQLSITM LFPLLAADVS WAELSPLGWG
GILCVLTLMF VVRPIGVGVA TIGLPLDLQQ RLFLGWLAPR GIVTASVASL FSIRLEQAGI
LGAGRLQGLV FLTILMTVGL QGLTAQPLAR MLGLIQQDSE PGEEESAEAA LKAG