Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1720 |
Symbol | |
ID | 3742954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 1657613 |
End bp | 1658857 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637771912 |
Product | CPA1 family Na+/H+ antiporter |
Protein accession | YP_377722 |
Protein GI | 78185287 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGCCTG AGCGGCTAGG TCTGCTGTGG GGAATCACCG TGTTCTCCGG GGCCGCGGCG CGTTTGGTGG CGGCCTTTTC CGGATTGCCT GGGGTGGTTT TGCTGTTGCT TTCAGGCCTC TTGATTGGGC GGTCTGGACT GGGGCTTGTC GAACCCCTCG ATCTCGGCCC AGGCCTTGGG ACGATCGTGG GATTACTGGT CAGCCTTGTG CTGTTCGACG GGGGAATGAA CCTCCGTCTT CCGGGCGACA CGATTAAGGC AACCGTTCAG CGCATTGCTG TTTTGCGGTT GCTGATCTCG CTTGGTGGCG GCTTGCTGGC GGCCCATTGG CTAGCGGGTC TGAGTTGGTC GGTGGCGGCT GTGTTCAGTG CGATTGTTTT GGCCACAGGC CCAACCGTGG TCACCCCGTT GGTGCGCCAA ATCCGCTTGG CCGCTCCCCT GGGGGATGTG CTGGAGGCCG AAGGTCTGCT GTTAGAGCCG ATTGGGGCGG TTCTTGCGTT GCTTTTGCTG GAGTTAGTGC TCGGCAACCT TCATGGCTGG AGGGAGCTGG CGATTGGTTT GCTGTCGCGG CTTGGTGGTG GAGTTTTATT TGGAGCGGGA GTGGGTTGGC TGCTCTCGGA GGTGTTGCGT CGCCTCAAAC CTGAGCAATC CTCAGGTTTG CCCTTGCAAT TGAGCTTGGG GATGCTGTTT CTGATGTACG GCGTCAGTGA ATGGCTGTTG CCGGAATCAG CATTGCCCGC GTCCGTTGCG GCAGGAATCG TTGTGGGTCG TCGACCTGGC TTTTACACAG CTGAATTTGA ACGTTTGATT CAAGAGCTGG CGCAGTTGTC GATCACGATG CTCTTTCCCT TACTGGCGGC GGATGTGTCT TGGGCTGAGC TCAGTCCTTT GGGCTGGGGC GGAATTCTTT GTGTTCTCAC GTTGATGTTT GTGGTGAGGC CTATCGGCGT TGGTGTTGCC ACGATTGGGT TGCCATTGGA CCTCCAGCAA CGCTTGTTCC TTGGTTGGCT CGCACCCCGC GGCATCGTTA CGGCTTCAGT GGCCTCGTTG TTCTCTATTC GTTTGGAACA AGCCGGCATT CTTGGAGCCG GCCGCCTGCA GGGCTTGGTG TTCCTGACGA TTTTGATGAC TGTGGGCTTG CAGGGGCTGA CCGCCCAGCC TTTGGCGCGG ATGCTGGGGT TGATCCAACA GGATTCAGAG CCCGGCGAGG AGGAATCAGC TGAGGCAGCG CTGAAGGCGG GGTAA
|
Protein sequence | MTPERLGLLW GITVFSGAAA RLVAAFSGLP GVVLLLLSGL LIGRSGLGLV EPLDLGPGLG TIVGLLVSLV LFDGGMNLRL PGDTIKATVQ RIAVLRLLIS LGGGLLAAHW LAGLSWSVAA VFSAIVLATG PTVVTPLVRQ IRLAAPLGDV LEAEGLLLEP IGAVLALLLL ELVLGNLHGW RELAIGLLSR LGGGVLFGAG VGWLLSEVLR RLKPEQSSGL PLQLSLGMLF LMYGVSEWLL PESALPASVA AGIVVGRRPG FYTAEFERLI QELAQLSITM LFPLLAADVS WAELSPLGWG GILCVLTLMF VVRPIGVGVA TIGLPLDLQQ RLFLGWLAPR GIVTASVASL FSIRLEQAGI LGAGRLQGLV FLTILMTVGL QGLTAQPLAR MLGLIQQDSE PGEEESAEAA LKAG
|
| |