Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1650 |
Symbol | |
ID | 3743928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 1596215 |
End bp | 1597360 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637771842 |
Product | geranylgeranyl reductase |
Protein accession | YP_377652 |
Protein GI | 78185217 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGAAG CCGTTCCAAC CAGCTGCGAT GTTCTGGTCA TCGGCGCTGG TGCAGCGGGG GGAGCAGCCG CCTTTCATCT CGCTGCAGCA GGCCATCGCG TTGTTGTGGT GGAAAAAGAT GCGGAGCTCC GGGTGAAACC CTGCGGTGGT GGCATGGCGG CTTCTGTTCA GCAGTGGTTT CCGTTTTCGC TTGAACCAGC CGTCGAACAG GTGATTCGCG AGGTGGATTT CAGCTGGTGC CTCAACGATC CGGTGGTGGC AGAGCTACCG GGCGACGCTC CCTTTTGGAT CGTTCGACGC GAACGGCTCG ATCAACTTCT TGCCGAACAC GCTGTTGAGG CTGGTGCAGA GCACTACAGA GGTGTCGCGG TCCATCGGGT TGAGCGTCAT GGCAACCACT GGGAGGTGTC GGCCAGCGAT GGGCTGCAGT GGTGCAGCCG AGCCGTGGTG ATCGCTGATG GCTCAGGATC CCCCTGGCCG CAGCAACTCG GCCTTGGCCC AAAGCACGTA CAAATGGCCT CCACCATGTC GGTGCGGTTG GAGGGCCAAG GACAACTAGC TGATGGCACA ACCCGCTTTG AATTCGGGCT GGTAAAGCAG GGCTTTGCCT GGGCCTTTCC CATCGCCGGA GGCGTGAACA TCGGTGTGGG GAGCTTTATC GGCAAACAAG ACGCTGATCC TGATGCTGTC TTGAGTGAGC TCTTGCCCGA TTTGGGCTTC GAGGCCTCTG CAGGCATCCG CCAACGGGGG CAACTGCGCG TCTGGAATGG TCACCATCGA TTGGATGGTG ACGGTGTTGT GGTGGTTGGA GATGCAGCGT CGCTTTGCGA TCCCTTCCTG GCGGAAGGCT TAAGGCCAGC CCTGATGAGC GGTTGCGAAG CAGCCCATCA TCTGGACCTC TGGCTCAAGG GTGAGCAAAC CAATCTGCGG GGCTACAGCC AAGCCATGCG TCGCCGCTGG GGAGACTCCA TGGCCTGGGG TCGGCGCATC GCCCAGGTGT TTTATCGCTT TCCTGGTGTG GGCTATCAAC TCGGCATCAA ACGACCCACC GCACCACAAC GCATTGCACA AATCCTGTCG GGTGAGATGG GGTACGGCGA CATCGCGCAG AGAGTGATCA AGCGCTTACT GCTGCAACGG AGTTAA
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Protein sequence | MSEAVPTSCD VLVIGAGAAG GAAAFHLAAA GHRVVVVEKD AELRVKPCGG GMAASVQQWF PFSLEPAVEQ VIREVDFSWC LNDPVVAELP GDAPFWIVRR ERLDQLLAEH AVEAGAEHYR GVAVHRVERH GNHWEVSASD GLQWCSRAVV IADGSGSPWP QQLGLGPKHV QMASTMSVRL EGQGQLADGT TRFEFGLVKQ GFAWAFPIAG GVNIGVGSFI GKQDADPDAV LSELLPDLGF EASAGIRQRG QLRVWNGHHR LDGDGVVVVG DAASLCDPFL AEGLRPALMS GCEAAHHLDL WLKGEQTNLR GYSQAMRRRW GDSMAWGRRI AQVFYRFPGV GYQLGIKRPT APQRIAQILS GEMGYGDIAQ RVIKRLLLQR S
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