Gene Syncc9902_1650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1650 
Symbol 
ID3743928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1596215 
End bp1597360 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content60% 
IMG OID637771842 
Productgeranylgeranyl reductase 
Protein accessionYP_377652 
Protein GI78185217 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID[TIGR02032] geranylgeranyl reductase family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGAAG CCGTTCCAAC CAGCTGCGAT GTTCTGGTCA TCGGCGCTGG TGCAGCGGGG 
GGAGCAGCCG CCTTTCATCT CGCTGCAGCA GGCCATCGCG TTGTTGTGGT GGAAAAAGAT
GCGGAGCTCC GGGTGAAACC CTGCGGTGGT GGCATGGCGG CTTCTGTTCA GCAGTGGTTT
CCGTTTTCGC TTGAACCAGC CGTCGAACAG GTGATTCGCG AGGTGGATTT CAGCTGGTGC
CTCAACGATC CGGTGGTGGC AGAGCTACCG GGCGACGCTC CCTTTTGGAT CGTTCGACGC
GAACGGCTCG ATCAACTTCT TGCCGAACAC GCTGTTGAGG CTGGTGCAGA GCACTACAGA
GGTGTCGCGG TCCATCGGGT TGAGCGTCAT GGCAACCACT GGGAGGTGTC GGCCAGCGAT
GGGCTGCAGT GGTGCAGCCG AGCCGTGGTG ATCGCTGATG GCTCAGGATC CCCCTGGCCG
CAGCAACTCG GCCTTGGCCC AAAGCACGTA CAAATGGCCT CCACCATGTC GGTGCGGTTG
GAGGGCCAAG GACAACTAGC TGATGGCACA ACCCGCTTTG AATTCGGGCT GGTAAAGCAG
GGCTTTGCCT GGGCCTTTCC CATCGCCGGA GGCGTGAACA TCGGTGTGGG GAGCTTTATC
GGCAAACAAG ACGCTGATCC TGATGCTGTC TTGAGTGAGC TCTTGCCCGA TTTGGGCTTC
GAGGCCTCTG CAGGCATCCG CCAACGGGGG CAACTGCGCG TCTGGAATGG TCACCATCGA
TTGGATGGTG ACGGTGTTGT GGTGGTTGGA GATGCAGCGT CGCTTTGCGA TCCCTTCCTG
GCGGAAGGCT TAAGGCCAGC CCTGATGAGC GGTTGCGAAG CAGCCCATCA TCTGGACCTC
TGGCTCAAGG GTGAGCAAAC CAATCTGCGG GGCTACAGCC AAGCCATGCG TCGCCGCTGG
GGAGACTCCA TGGCCTGGGG TCGGCGCATC GCCCAGGTGT TTTATCGCTT TCCTGGTGTG
GGCTATCAAC TCGGCATCAA ACGACCCACC GCACCACAAC GCATTGCACA AATCCTGTCG
GGTGAGATGG GGTACGGCGA CATCGCGCAG AGAGTGATCA AGCGCTTACT GCTGCAACGG
AGTTAA
 
Protein sequence
MSEAVPTSCD VLVIGAGAAG GAAAFHLAAA GHRVVVVEKD AELRVKPCGG GMAASVQQWF 
PFSLEPAVEQ VIREVDFSWC LNDPVVAELP GDAPFWIVRR ERLDQLLAEH AVEAGAEHYR
GVAVHRVERH GNHWEVSASD GLQWCSRAVV IADGSGSPWP QQLGLGPKHV QMASTMSVRL
EGQGQLADGT TRFEFGLVKQ GFAWAFPIAG GVNIGVGSFI GKQDADPDAV LSELLPDLGF
EASAGIRQRG QLRVWNGHHR LDGDGVVVVG DAASLCDPFL AEGLRPALMS GCEAAHHLDL
WLKGEQTNLR GYSQAMRRRW GDSMAWGRRI AQVFYRFPGV GYQLGIKRPT APQRIAQILS
GEMGYGDIAQ RVIKRLLLQR S