Gene Syncc9902_1606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1606 
Symbol 
ID3741860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1554049 
End bp1555539 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content56% 
IMG OID637771797 
Productproton-translocating NADH-quinone oxidoreductase, chain M 
Protein accessionYP_377608 
Protein GI78185173 
COG category[C] Energy production and conversion 
COG ID[COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) 
TIGRFAM ID[TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCTCT CGCTCCTACT TCTGATCCCG TTCTCTGGGG CTCTCGGTTT ACTGCTTTGG 
CCAACGACCC AAAGCAGTGA GCGGATTCGG ATCGGCGCGA TTGTGATTTT GGTGGTGCAA
TGCGTTGCCA GTTTTGCCCT GTTGCTTCCT TTCGACCCCA CCGATGCAGC CCTGCAACTG
GTCGAGCAGG CTCGCTGGGT GCATTCCATT GGCCTTGATT ACGCCTTGGC AGTGGATGGT
TTGTCGCTGC CACTGGTGCT GATGAATGCC GTGCTGTGTT TGGTGGCAGC AGTGGCGTCC
CGATCCATCG ACAACCGTCC GAGGATTTAT TTCGCCCTCC TGCTGGTGAT CAGTGGTGCG
GTGAATGGAG CGTTTCTCTC TCAAAACCTG CTTCTCTTTT TCCTCTTCTA TGAATTAGAG
CTGATTCCGC TGTGGCTCTT AATTGCTGTT TGGGGAGGGG CGAATCGCTC CTATGCCGCA
ACAAAGTTTT TGATCGTTAC GGCTGTGTCG GGAATGTTGA TTCTTGGCGC GTTCCTGGGG
CTTGCCTTCG TCACCGGAAC GATGGATTTC AGCCTGAGGC CAATCCTGAG CGGTGAATTG
GGATTGAAAG CTCAGTTCTT GCTGATGGGA GCTCTGCTGA TTGGTTTCGG CATCAAAATT
CCGCTGTTCC CGTTCCACAC CTGGCTACCC GATGCCCACA CGGAGGCATC AACACCAGTT
TCCGTGCTTT TGGCTGGTGT TCTGTTGAAG TTGGGAACGT ACGGTCTGCT GCGTTTTTGC
TTGGGTTTAT TCCCAGAGGC TTGGCAGTTG GCAGCCCCTT GGCTGGCTGC TTGGGCCGCC
ATTTCAGTGC TGTATGGCTC GCTGGCGGCC ATTGCCCAAA CAGATATGAA ACGGATGGTG
GCTTACAGCT CCGTTGGCCA CATGGGATAC GTCCTATTGG CAGCAGCAGC GGCGACTCCC
CTGGGATTGA TGGGGGCGCT GTTCCAGATG ATTAGTCATG GCTTGATTTC AGGCGTGTTG
TTTCTCTTGG TGGGTGTGGT TTACGCCCGG ACGGGCACGA GGGATCTCAA TGTTTTGCGG
GGCCTCCTCA ACCCCGAACG GGGCCTGCCG CTGACGGGAT CCCTCATGAT CATTGGCGTG
ATGGCGAGTG CGGGTATTCC TGGTATGGCT GGTTTTATCT CAGAATTCCT GATTTTCCGG
GGCAGTTTGC AACCGTTCCC TGTTGCCACC CTGCTCTCGA TGGTGGGATC TGGCTTAACC
GCTGTTTATT TTCTGTTGTT GGTGAACCGC GCATTCTTTG GGCGTTTGGC CATTGCTCCA
GGCGAAGTCG CCAATCCGCG CGTTCTGGAT CGGGTTTCCC TGCGCGAGCA GGTGCCAGCG
ATTGCCTTGA GCCTTGGTGT TCTGGCCCTT GGTTTGGCTC CTGAGCTGCT CTCCAACCTC
AGCGAGGCCG CCACAACCGG ATTGAGTCAA CTCAGCGGAG GATTGTCATG A
 
Protein sequence
MLLSLLLLIP FSGALGLLLW PTTQSSERIR IGAIVILVVQ CVASFALLLP FDPTDAALQL 
VEQARWVHSI GLDYALAVDG LSLPLVLMNA VLCLVAAVAS RSIDNRPRIY FALLLVISGA
VNGAFLSQNL LLFFLFYELE LIPLWLLIAV WGGANRSYAA TKFLIVTAVS GMLILGAFLG
LAFVTGTMDF SLRPILSGEL GLKAQFLLMG ALLIGFGIKI PLFPFHTWLP DAHTEASTPV
SVLLAGVLLK LGTYGLLRFC LGLFPEAWQL AAPWLAAWAA ISVLYGSLAA IAQTDMKRMV
AYSSVGHMGY VLLAAAAATP LGLMGALFQM ISHGLISGVL FLLVGVVYAR TGTRDLNVLR
GLLNPERGLP LTGSLMIIGV MASAGIPGMA GFISEFLIFR GSLQPFPVAT LLSMVGSGLT
AVYFLLLVNR AFFGRLAIAP GEVANPRVLD RVSLREQVPA IALSLGVLAL GLAPELLSNL
SEAATTGLSQ LSGGLS