Gene Syncc9902_1577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1577 
Symbol 
ID3741988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand+ 
Start bp1525598 
End bp1526287 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content60% 
IMG OID637771766 
ProducttRNA (guanosine-2'-O-)-methyltransferase 
Protein accessionYP_377579 
Protein GI78185144 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCTGC TGCCTCGTCG GTTTGAACGA CTCAAGTCCG TCTTGAACCA CCGCATGGCG 
GATCTCACCG TGCTGCTCGA GCACGTGGAG AAGCCCCATA ACCTTTCGGC CATCCTGCGT 
AGCTGCGATG CCGTTGGAGC CCTGGAGGCC CATGCGGTGA GTTTCTCGGG ACGGCCGCGC 
ACCTACAACA GCACTGCCCA AGGGAGCCAA AAGTGGGTGC CGTTGAACGA TCATCCCGAC 
ATCGAAACGG CAATCAAGGT TCTGAAGGCC AAGGGATTCC GCTTGTATGG CACCCATCTC 
GGTACGAATG CCAAGGACTA TCGGGACTGC GATTTCACCG GGCCGACCGC CTTCGTGCTG 
GGAGCAGAAA AATGGGGCCT AAGCGATCAA GCTCGTGATC TGATGGATGA AGCCCTGTTC 
ATTCCGATGC GCGGGATGGT GCAGTCCCTG AACGTGTCCG TCGCCACGGC CACGCTGCTA 
TTCGAATCCT TGCGCCAACG ACAAGCGGCG GGGGTGGCCC CAAGTCATGG GGAAGGGCTA 
ACAGCCGAGC ACTACCAACA ACTGCTGGTC GAATGGTCGT ACCCCGAGGT GGCGGCATGG 
TGCCGTGAGC AGAACAGGCC CTATCCAGGC CTCAATGAAC AAGGGGAACT GATGGAAGAG 
TTGCCGCGCA CGGTGAAGCT GCGCTGCTGA
 
Protein sequence
MPLLPRRFER LKSVLNHRMA DLTVLLEHVE KPHNLSAILR SCDAVGALEA HAVSFSGRPR 
TYNSTAQGSQ KWVPLNDHPD IETAIKVLKA KGFRLYGTHL GTNAKDYRDC DFTGPTAFVL 
GAEKWGLSDQ ARDLMDEALF IPMRGMVQSL NVSVATATLL FESLRQRQAA GVAPSHGEGL 
TAEHYQQLLV EWSYPEVAAW CREQNRPYPG LNEQGELMEE LPRTVKLRC