| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1536 |
|---|
| Symbol | |
|---|
| ID | 3743392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 1486242 |
|---|
| End bp | 1486790 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637771724 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_377538 |
|---|
| Protein GI | 78185103 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1357] Uncharacterized low-complexity proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.916018 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCAGA CCGTGATGCG CCATTCGGTT TTGCGAGCAG CTCTGGCAGT CGTGCTCATG
GTGTGTCTTT GGGTTGCGCC CAGTACCGCC ATCGCCCTCG ACACCTCCGC CGGTTTTGGA
TTGCAAGATC GTGCGCTCTT TCAGGAAACG GTCGATTACA CCCTCACCAA CCAAAGCAAC
GGGGATTTTC GAGGTCAAAA TCTGGCCAAC ACCTCATTTG CTGGAGCGAC AGGCCGGGGG
GCCGATTTTC GCGACGCGAA CCTCCATGGC GCAATCCTCA CGCAAGGGGC TTTTGCTGAA
GCGGATTTCC GAGGAGCCGA CCTATCCGAT GCCCTAATGG ACCGTGCCGA TTTCGTGGCC
ACAGATCTGC GGGATGCCGT CCTAATTGGC GTGATCGCTT CAGGCAGCAG TTTCAGTAAA
GCCCTGATTG AAGGCGCCGA TTTCACCGAC GCCCTGCTGG ATCGTGATGA CCAACGACTC
CTATGCCGCG ATGCCGATGG CATCAATCCA ACCACCGGCA TATCCACCTT CGACAGCTTG
GGCTGTTGA
|
|---|
| Protein sequence | MDQTVMRHSV LRAALAVVLM VCLWVAPSTA IALDTSAGFG LQDRALFQET VDYTLTNQSN
GDFRGQNLAN TSFAGATGRG ADFRDANLHG AILTQGAFAE ADFRGADLSD ALMDRADFVA
TDLRDAVLIG VIASGSSFSK ALIEGADFTD ALLDRDDQRL LCRDADGINP TTGISTFDSL
GC
|
|---|
| |