Gene Syncc9902_1534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1534 
Symbol 
ID3743390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1483805 
End bp1484989 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content59% 
IMG OID637771722 
Productacetylornithine aminotransferase 
Protein accessionYP_377536 
Protein GI78185101 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID[TIGR00707] acetylornithine and succinylornithine aminotransferases 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.719069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCACCT ACAACCGTTA TCCACTGACT TTGGTCAGTG GACGCGGCTG TTGGCTTCGC 
GACGATCAAG GGCATCGATA TTTGGACGCG GTGGCAGGAA TCGCCACTTG CACGTTGGGC
CACAGCGACA GGGTGATGCG TCGTGCGCTG AAGGATCAGC TGAATCGACT GCAGCACGTC
TCCAACCTGT ACCAAATCCC AGAGCAAGAA CAACTGGCCC GCTGGCTCGT CGACAACAGC
TGCGCCGATA GCGTTTTTTT CTGCAACTCC GGGGCTGAGG CCAATGAAGC GGCCATCAAG
TTGGCTCGCA AGCATGGCCA TCAACGCCTT GGCATCGAAC GCCCGGTCAT CCTGACGGCA
GCGGCCAGTT TTCACGGGCG AACCTTGGCA GCCGTCAGCG CCACGGGTCA GCCGAGATAT
CACAAGGGTT TTGAACCCAT GGTGGAGGGT TTCGAAACCT TCGAATACAA CAACCTTGCC
AGTTTTGAGG CCTTACTTGC GCGTTCGGAA GCCAATGGCC CAAGGGTGTC GGCTGTCTTG
ATCGAACCGC TTCAGGGGGA AGGGGGAGTC ATTCCCGGCG ATCCAGCCAT TTTTCAAGCG
ATCCGGCGCC ATTGCAGCCA AAGAGAGATC CTGCTGATCT TCGACGAAGT GCAAGTCGGC
ATGGGCCGTA GCGGTCAACT TTGGGGTTAT GAGCAGCTTG GGGTCACCCC TGACGCCATC
ACCTTGGCGA AAGGCCTCGG CGGTGGCCAT GCCATTGGTG CCTTGCTGGT GAACCAACAG
GCCGACATTT TTGAACCCGG CGACCACGCC AGCACCTTTG GAGGCAATCC ATTTGCCTGT
CGAGCCGGTC TCACCGTGGC GAGGGAACTG GAACGACGTC ATTTGCTCCG CAATGTGCGC
GAGCGCGGTG AGCAGCTACG CCACGGACTG GAAACCCTGG TCGAACGCTT CCCCAACGTG
CTGCACCAGG CCAGAGGGTG GGGCCTTCTG CAAGGTCTCG TACTTCGAGA CGATTGCGAA
CTCAATGCCG GAGCTGTTGT GAAAGCGGCT CTCGATCAAA AACTGCTACT CGTGCCCGCA
GGTCCGAAGG TTGTGCGCAT GGTGCCTGCC CTTGTGATCT CCCGTCGAGA CGTGTCTGCA
CTTCTCGCAC GCTTGGAGCG CACACTCCAA CTGCTTCAGG CGTGA
 
Protein sequence
MGTYNRYPLT LVSGRGCWLR DDQGHRYLDA VAGIATCTLG HSDRVMRRAL KDQLNRLQHV 
SNLYQIPEQE QLARWLVDNS CADSVFFCNS GAEANEAAIK LARKHGHQRL GIERPVILTA
AASFHGRTLA AVSATGQPRY HKGFEPMVEG FETFEYNNLA SFEALLARSE ANGPRVSAVL
IEPLQGEGGV IPGDPAIFQA IRRHCSQREI LLIFDEVQVG MGRSGQLWGY EQLGVTPDAI
TLAKGLGGGH AIGALLVNQQ ADIFEPGDHA STFGGNPFAC RAGLTVAREL ERRHLLRNVR
ERGEQLRHGL ETLVERFPNV LHQARGWGLL QGLVLRDDCE LNAGAVVKAA LDQKLLLVPA
GPKVVRMVPA LVISRRDVSA LLARLERTLQ LLQA