Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1502 |
Symbol | |
ID | 3741854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 1454745 |
End bp | 1455785 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637771689 |
Product | thiamine-phosphate pyrophosphorylase |
Protein accession | YP_377504 |
Protein GI | 78185069 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0352] Thiamine monophosphate synthase |
TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.63479 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGATTGG TTGATCCACG GGTGGCACGA CTGATCGATG CCAATCTCGA TCGATCCAGG GAAGGCCTGC GCGTCGTGGA GGACTGGTGC CGGTTTGGCC TAGAGCGCGA CGATCTGGTT GTACAACTCA AAGATTGGCG GCAACGCCTG GGGCGACTTC ACCGAAGCAC TTATAAACAG GCGCGATCGA CGGCCACAGA CCCTGGGGCT GGGCTCAGCC ATCCAGCCCA ACTGGAACGT GACAATCCCC AAGCAGTGGT GGCGGCCAAT TGCGGCCGTG TGCAAGAAGC GCTTCGCGTA TTGGAGGAAT ACGGCCGCAG CATTGATCCA TCCCTGGCAT CCGAATCAGC CGCGATCCGT TACGGGCTTT ACGACCTGGA AGTCACTTGT CTCAACGCCA GTTTGGGCAA CGCACGTCGC CAAACCCTGA ACAACTGCCA GCTATGCCTG ATCACTACCC CATGCCCCGA TCTCATTGAG CGGGTGAGAC AGTCCCTCAC TGCCGGGGTG ACGATGGTGC AGTACCGCTG CAAAAGCGGA AACGACCGTG AGCGCCTTGA TGAAGCCAAG GCATTGCGAA TGCTGTGTCA GACCCACGGA GCTCTCTTTG TGATCAATGA CCGCATCGAT CTAGCCCTCG CAGTCGATGC CGATGGCGTG CACCTCGGCC AAGACGATCT ACCCACCGAT GTTGCCCGAG ACTTAATCGG AGAAGCTCGA CTACTCGGGC GCAGCACCCA CACCCTGGAC GACGTGCGCC GTGCGGATAC CGAAGCCTGC GATTACTTGG GGCTCGGACC GGTTCACACC ACTGCTGTTA AACCAGAAAA AGCCGCAATC GGCCCGGTGC GTCTTCAAGA TGCCCAGGCA CTGACCCGTC TCCCGGTGTT CGCCATTGGC GGCATTGAGC TCAAGAACAT CACGGCACTC CTCGATGTGG GTTGCCGGCG CGTTGCTGTG ATCGGCGCAA TCATGGCTGC GGAGAACCCT GAGAGCGCTA GTCAACAGTT GCTTCAGGCC TTATTGCCCC CCGTCGATTG A
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Protein sequence | MRLVDPRVAR LIDANLDRSR EGLRVVEDWC RFGLERDDLV VQLKDWRQRL GRLHRSTYKQ ARSTATDPGA GLSHPAQLER DNPQAVVAAN CGRVQEALRV LEEYGRSIDP SLASESAAIR YGLYDLEVTC LNASLGNARR QTLNNCQLCL ITTPCPDLIE RVRQSLTAGV TMVQYRCKSG NDRERLDEAK ALRMLCQTHG ALFVINDRID LALAVDADGV HLGQDDLPTD VARDLIGEAR LLGRSTHTLD DVRRADTEAC DYLGLGPVHT TAVKPEKAAI GPVRLQDAQA LTRLPVFAIG GIELKNITAL LDVGCRRVAV IGAIMAAENP ESASQQLLQA LLPPVD
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