| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1423 |
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| Symbol | |
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| ID | 3742594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 1386649 |
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| End bp | 1388205 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637771612 |
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| Product | carotenoid isomerase |
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| Protein accession | YP_377431 |
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| Protein GI | 78184996 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02730] carotene isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGTCGATC AGCAGCAATG GGATGCCGTC GTGATCGGCT CTGGTGTGGG TGGTTTGGTC
ACAGCGAGCC AGCTTGCGGC GAAGGGTGCA AAAACGCTGG TACTGGAGAG GTACCTCATC
CCTGGCGGTA GTGGAGGCGC GTTTCATCGG AACGGCTACA CCTTTGATGT GGGTGCCTCG
ATGATTTTTG GATTTGGGGA GAAGGGCTAC ACCAACCTGC TGACGCGCGC CCTGGCGGAC
ATCGGGGAAC ACTGCGACAC CATTCCCGAT CAGGCCCAGC TGGAATATCA CATGCCTGGC
GGGTTACGCA TTGCCGTCGA CCGTGATTAC GACACCTTTA TTGCGGATCT TTCAGCCCGT
TTCCCCCATG AAGCCGAAGG TATTCGTCGC TTCTATGACG CCTGCTGGCA GGTGTTCAAC
TGCCTAGATG CGATGCCGTT GTTGTCGCTT GAGGACCCTG CTTATCTCAC CAAGGTTTTT
TTCAAAGCGC CCTTCGCCTG CTTGGGGTTA GCGCGTTGGC TTCCCTTCAA CGTCGGGGCC
GTTGCGCGTC AACACATCAA AGATCCACAA CTGTTGAAGT TCATTGATAT CGAATGTTTT
TGCTGGTCGG TGATGCCAGC CGATCGCACA CCAATGATCA ACGCAGGCAT GGTCTTTTCA
GACCGTCATG CCGGTGGAAT CAATTACCCC AAAGGTGGAG TGGGTGTGAT CTCTCAGAAG
CTTGTGAAAG GGTTGGAGCG CCATGGCGGA TCGATTCGTT ACAAAGCCCG CGTCACCCAA
GTGTTGATCG AGAAGGGCCA GGCCGTTGGC GTGAAGCTGG CTGATGGCGA AATCATCTAT
GCCAAACGGG TGATTTCCAA TGCCACCCGT TGGGACACCT TCTCGGGTGA GGTGGCAGGG
ACAAAGGGGG AAGGTCAGGC CCTCGTCGGT TCCGACCAAA CACCGGCCAA GGAGCAGGTT
TGGCGCCGAC GTTACGTACC GTCGCCCTCG TTTTTATCGC TACATCTGGG CGTACGGGCC
GATGTGATTC CGGCTGGCAC CCATTGCCAT CACTTGTTGC TGGAGGACTG GGAGCGGATG
GAAGACGAGC AGGGCGTGAT TTTTGTGTCG ATGCCATCGC TGCTCGATCC CGATTTAGCA
CCGTCGGGGC ATCACATCGT CCATACGTTT ACGCCGTCAT CGATGGAGGC ATGGAAAGGG
CTGAGTCCGT CGGATTACAA AGTCAAAAAA GAGGCTGATG CGGCACGGAT GATTCAACGC
TTAGAGGCCA TTCTTCCTGG TCTCTCTGGG GCGATCACCC ACAAGGAGAT CGGAACACCG
CGCAGCCACC GGCGCTTTCT GGGACGATTT CAAGGCAGTT ATGGGCCGAT TCCAGCGATG
CAATTGCCGG GGTTGTTGCC GATGCCGTTC AATCGCACGG GAGTGAAGCA CCTGTATTGC
GTTGGGGATT CTTGTTTCCC CGGGCAAGGG CTGAATGCAG TTGCCTTCAG CGGTTTTGCC
TGCGCGCATC GGGTTGGTGC CGATTTAGGC CTGAACCCCT GGGCCCTGCC GGCGTGA
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| Protein sequence | MVDQQQWDAV VIGSGVGGLV TASQLAAKGA KTLVLERYLI PGGSGGAFHR NGYTFDVGAS
MIFGFGEKGY TNLLTRALAD IGEHCDTIPD QAQLEYHMPG GLRIAVDRDY DTFIADLSAR
FPHEAEGIRR FYDACWQVFN CLDAMPLLSL EDPAYLTKVF FKAPFACLGL ARWLPFNVGA
VARQHIKDPQ LLKFIDIECF CWSVMPADRT PMINAGMVFS DRHAGGINYP KGGVGVISQK
LVKGLERHGG SIRYKARVTQ VLIEKGQAVG VKLADGEIIY AKRVISNATR WDTFSGEVAG
TKGEGQALVG SDQTPAKEQV WRRRYVPSPS FLSLHLGVRA DVIPAGTHCH HLLLEDWERM
EDEQGVIFVS MPSLLDPDLA PSGHHIVHTF TPSSMEAWKG LSPSDYKVKK EADAARMIQR
LEAILPGLSG AITHKEIGTP RSHRRFLGRF QGSYGPIPAM QLPGLLPMPF NRTGVKHLYC
VGDSCFPGQG LNAVAFSGFA CAHRVGADLG LNPWALPA
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