| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1420 |
|---|
| Symbol | |
|---|
| ID | 3742591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 1385102 |
|---|
| End bp | 1385806 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637771609 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_377428 |
|---|
| Protein GI | 78184993 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGGCT CCGGAAGCGG TCTTGAACCC TCACGTGTTC TGGTGGTTGA GCCTCATCCC
ACCCTGCGCA CTGTTCTGGT GCAGCGTCTT CGTCAAGACG GTCACCTCAC CGCAGCCGTG
GGTCGAGCCG TCGAAGCCCT TGAAATTTGT CAGGATCAAT CGCCAGATCT CTTGGTGAGC
GCAGAGATCC TTGAGCAGAG TTCTGCCCTC CGCCTCGCTG GACAACTGCG TTGCCCAGTG
ATCGTGTTAA CAGCTCGCAG TGGTGCCGAA CCTGTTGTCG GCCTATTAGA AGATGGTGCA
GACGATGTTT TGCGCAAGCC CTTTGGGCTG GAAGAGTTAG CAGCGCGTTG CCGCACCCTT
TTAAAGAGAG GTCATAGCGG TCTGCAAGAG CGCGTCACCG TCGGTCCCCT AGAGGTGCAT
CTCTTGCTGA GACAGGTCAC GCTCCGCGAC AAACCTGTGG AACTCAGTCC TCGGGAATTT
GCTCTGCTCT GCGCCTTACT CATGCCCCCA GGGCTGGTAC GCAGTCGCCA AGAATTGCTT
CGGATGGCAT GGCCTCCCTT CAGTGGTGGT CCTCGCTCTG TGGATACTCA AGTTCTAACC
CTGCGGCGCA AGCTCGAGCA GGCAGGTCTT GGCGAGGGCG GTGGGATCAC CACTGTGCGT
CAACGGGGCT ATCGCTTCAG CCTGGATAAC TTGCCGGCAA GCTGA
|
|---|
| Protein sequence | MPGSGSGLEP SRVLVVEPHP TLRTVLVQRL RQDGHLTAAV GRAVEALEIC QDQSPDLLVS
AEILEQSSAL RLAGQLRCPV IVLTARSGAE PVVGLLEDGA DDVLRKPFGL EELAARCRTL
LKRGHSGLQE RVTVGPLEVH LLLRQVTLRD KPVELSPREF ALLCALLMPP GLVRSRQELL
RMAWPPFSGG PRSVDTQVLT LRRKLEQAGL GEGGGITTVR QRGYRFSLDN LPAS
|
|---|
| |