Gene Syncc9902_1392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1392 
Symbol 
ID3742523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1357606 
End bp1358436 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content56% 
IMG OID637771578 
Producthypothetical protein 
Protein accessionYP_377400 
Protein GI78184965 
COG category[S] Function unknown 
COG ID[COG1624] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00159] conserved hypothetical protein TIGR00159 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGACGTTT TCGCGGAGGA GAACCTGCGC ATCGTCCTCG ACGTTCTGTT TGCCTCTGCC 
ATCGGTTTTT TAATGCTGTC CAGGGTTCGT GAGGCACGAA CCCTGTGGTT GTTGCGGGGA
TATCTGTTTC TTGTCGCGAC AGCCTGGTTT GTTCAGCGAT TTGCCAACCT CCCCCTCACC
ACCCAATTGG TGGATGCGTT GGTGTTGGCC TGTTCCTTGT CTTTGGCCAT CCTTTGGCAG
GGCGAGTTGC GCCGCTTGAT GGAACTCCTT GGAACTGGGC GGCTCGCTGT TTTGCTGGGT
AATCCCCAAA AAGAATTCAA AGCGGCTGAA GGCACCATTG CCCAGCTCAC TGAAGCCGCC
GGACGGCTCT CTCAGCAGCG ACGTGGCGCC CTAATCGTGG TGGATCTCGG CAGCGACCTG
CGACCAGAAG ATTTTCTCAA TCCAGGTGTC GCCATTGGCG CCCAACTCAG CCGAGAATTG
TTGTTGAACG TGTTTGCCGC AGACACACCT CTCCATGACG GAGCCGTGTT GGTCCGAGGC
AATCGGATTG AATCAGCTGG AGTGATCCTT CCCTTATCGC GTCACAGCGT GAGTCGTTAC
GGCACAAGGC ACCTCGCAGC CCTTGGAATT ACGGAACGCT TCGATCGCTG CATTTGCATC
GTTGTGTCCG AGGAAACCGG AACTCTCTCT TTGGCCAATC AGGGAAAACT CGAACGACCA
ATCACCAGCA GCCGCTTAGA GACGCTGCTA AGGGAACTGT TCAGCAATAC CGAGGCACGA
CAGCCAGCGA GGCGTACCGT GGGTACCTCA TCATCCGATT CGCTGACTTG A
 
Protein sequence
MDVFAEENLR IVLDVLFASA IGFLMLSRVR EARTLWLLRG YLFLVATAWF VQRFANLPLT 
TQLVDALVLA CSLSLAILWQ GELRRLMELL GTGRLAVLLG NPQKEFKAAE GTIAQLTEAA
GRLSQQRRGA LIVVDLGSDL RPEDFLNPGV AIGAQLSREL LLNVFAADTP LHDGAVLVRG
NRIESAGVIL PLSRHSVSRY GTRHLAALGI TERFDRCICI VVSEETGTLS LANQGKLERP
ITSSRLETLL RELFSNTEAR QPARRTVGTS SSDSLT