Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1391 |
Symbol | |
ID | 3742522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 1356203 |
End bp | 1357582 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637771577 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_377399 |
Protein GI | 78184964 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCCAGA CCATCACCAA TGCAAGGCCC TATGAGGCGG ATCTGGATCC GGAGAGTCCC AACCGAAATC TCACACCCTT AACAACCTCA TTGGATGGCG ACGATCGGCT CGTCGTGGGC GACTGTCTCT TAAGTGATCT CGCCCAGCGC TACGGCACTC CGTTGTACGT GCTTGATGAG ACAACCCTGC GCAGCACTTG CCGTGCCTAT CGGGATGCTT TGAAGCGTCA CTATCCCGGG CCATCCCTAC CGATTTATGC CTCAAAGGCC AACAGCTCAC TTGTGATGAG CAGCTTGGTG GCGTCTGAAG GTCTCGGCCT TGATGCTGTG TCTGCCGGAG AATTACTCAC TGCACTCCGG GGCGGAATGC CAGGCAATCG GATGGTGTTG CACGGCAACA ACAAATCCGA TGAAGAACTA CTTCTTGCCT ACAACAACAA CGTGACCGTG GTGGTGGACA ACCAGCACGA CCTCGACCGC CTCTCAGCCC TCATTCCCCA TGACGGCGCC CCCGTGCGGT TGATGCTGAG ATTCACCCCT GGCATCGAAT GCCACACGCA CGAGTACATC CGCACGGGAC ACCTCGACAG CAAATTTGGC TTTGATCCCG ACCAGGTGGA ACCCGTCCTG CGCGGATTGG TTGGTCAGTC CTGGGCGAAA TTGACGGGAC TTCATGCCCA CATCGGCTCA CAAATTTTTG AACTCGAGCC CCACCGTGAC CTTGCTGCGG TGATGGCCGA CGCCCTCAAA CTCGCCCGCG ACCTCGGGCA TCCCGTTGAA GATCTCAATG TGGGGGGCGG ACTTGGCATC CGTTATGTCA AATCCGACGA TCCACCAAGC ATCGACCGCT GGGTGCAAGT GGTCGCAGAA GCCGTCATTG CCGCTTGCCA AGCACGGAGC CTCGACTTAC CCCGACTGAT GTGTGAACCG GGCCGATCCT TAGTTGCCAC GGCGGGGGTG ACCTTGTATA CCGTTGGCTC AAGAAAAACG ATTCCAGGCG TTCGCACCTA CGTGGCCATT GATGGCGGCA TGAGTGACAA CCCACGGCCG ATTACTTATC AATCGCTCTA CACCTGCTGT GTTGCTGATC GTCCGTTGGC CGAAACGGAT GAAACCGTGA ATCTCGTCGG CAAACATTGT GAGTCGGGCG ATGTCTTGCT CAAAGACCTC CCTCTTCCAA GCACCACAAG CGGAGATGTC ATCGCCGTAT TTGCCACCGG TGCCTACAAC GCTTCGATGA GCTCGAACTA CAACCGCATT CCACGACCAG CGGCCGTACT CGTCCATGAC GGAGCTGCAG AACTGGTGCA GAAACGAGAG CAGCCGGATG ATTTGCTGCG CTACGACGTG CTGCCGCAAC GGTTCCACAA GGTACGTTAA
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Protein sequence | MTQTITNARP YEADLDPESP NRNLTPLTTS LDGDDRLVVG DCLLSDLAQR YGTPLYVLDE TTLRSTCRAY RDALKRHYPG PSLPIYASKA NSSLVMSSLV ASEGLGLDAV SAGELLTALR GGMPGNRMVL HGNNKSDEEL LLAYNNNVTV VVDNQHDLDR LSALIPHDGA PVRLMLRFTP GIECHTHEYI RTGHLDSKFG FDPDQVEPVL RGLVGQSWAK LTGLHAHIGS QIFELEPHRD LAAVMADALK LARDLGHPVE DLNVGGGLGI RYVKSDDPPS IDRWVQVVAE AVIAACQARS LDLPRLMCEP GRSLVATAGV TLYTVGSRKT IPGVRTYVAI DGGMSDNPRP ITYQSLYTCC VADRPLAETD ETVNLVGKHC ESGDVLLKDL PLPSTTSGDV IAVFATGAYN ASMSSNYNRI PRPAAVLVHD GAAELVQKRE QPDDLLRYDV LPQRFHKVR
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