Gene Syncc9902_1391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1391 
Symbol 
ID3742522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1356203 
End bp1357582 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content57% 
IMG OID637771577 
Productdiaminopimelate decarboxylase 
Protein accessionYP_377399 
Protein GI78184964 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID[TIGR01048] diaminopimelate decarboxylase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCCAGA CCATCACCAA TGCAAGGCCC TATGAGGCGG ATCTGGATCC GGAGAGTCCC 
AACCGAAATC TCACACCCTT AACAACCTCA TTGGATGGCG ACGATCGGCT CGTCGTGGGC
GACTGTCTCT TAAGTGATCT CGCCCAGCGC TACGGCACTC CGTTGTACGT GCTTGATGAG
ACAACCCTGC GCAGCACTTG CCGTGCCTAT CGGGATGCTT TGAAGCGTCA CTATCCCGGG
CCATCCCTAC CGATTTATGC CTCAAAGGCC AACAGCTCAC TTGTGATGAG CAGCTTGGTG
GCGTCTGAAG GTCTCGGCCT TGATGCTGTG TCTGCCGGAG AATTACTCAC TGCACTCCGG
GGCGGAATGC CAGGCAATCG GATGGTGTTG CACGGCAACA ACAAATCCGA TGAAGAACTA
CTTCTTGCCT ACAACAACAA CGTGACCGTG GTGGTGGACA ACCAGCACGA CCTCGACCGC
CTCTCAGCCC TCATTCCCCA TGACGGCGCC CCCGTGCGGT TGATGCTGAG ATTCACCCCT
GGCATCGAAT GCCACACGCA CGAGTACATC CGCACGGGAC ACCTCGACAG CAAATTTGGC
TTTGATCCCG ACCAGGTGGA ACCCGTCCTG CGCGGATTGG TTGGTCAGTC CTGGGCGAAA
TTGACGGGAC TTCATGCCCA CATCGGCTCA CAAATTTTTG AACTCGAGCC CCACCGTGAC
CTTGCTGCGG TGATGGCCGA CGCCCTCAAA CTCGCCCGCG ACCTCGGGCA TCCCGTTGAA
GATCTCAATG TGGGGGGCGG ACTTGGCATC CGTTATGTCA AATCCGACGA TCCACCAAGC
ATCGACCGCT GGGTGCAAGT GGTCGCAGAA GCCGTCATTG CCGCTTGCCA AGCACGGAGC
CTCGACTTAC CCCGACTGAT GTGTGAACCG GGCCGATCCT TAGTTGCCAC GGCGGGGGTG
ACCTTGTATA CCGTTGGCTC AAGAAAAACG ATTCCAGGCG TTCGCACCTA CGTGGCCATT
GATGGCGGCA TGAGTGACAA CCCACGGCCG ATTACTTATC AATCGCTCTA CACCTGCTGT
GTTGCTGATC GTCCGTTGGC CGAAACGGAT GAAACCGTGA ATCTCGTCGG CAAACATTGT
GAGTCGGGCG ATGTCTTGCT CAAAGACCTC CCTCTTCCAA GCACCACAAG CGGAGATGTC
ATCGCCGTAT TTGCCACCGG TGCCTACAAC GCTTCGATGA GCTCGAACTA CAACCGCATT
CCACGACCAG CGGCCGTACT CGTCCATGAC GGAGCTGCAG AACTGGTGCA GAAACGAGAG
CAGCCGGATG ATTTGCTGCG CTACGACGTG CTGCCGCAAC GGTTCCACAA GGTACGTTAA
 
Protein sequence
MTQTITNARP YEADLDPESP NRNLTPLTTS LDGDDRLVVG DCLLSDLAQR YGTPLYVLDE 
TTLRSTCRAY RDALKRHYPG PSLPIYASKA NSSLVMSSLV ASEGLGLDAV SAGELLTALR
GGMPGNRMVL HGNNKSDEEL LLAYNNNVTV VVDNQHDLDR LSALIPHDGA PVRLMLRFTP
GIECHTHEYI RTGHLDSKFG FDPDQVEPVL RGLVGQSWAK LTGLHAHIGS QIFELEPHRD
LAAVMADALK LARDLGHPVE DLNVGGGLGI RYVKSDDPPS IDRWVQVVAE AVIAACQARS
LDLPRLMCEP GRSLVATAGV TLYTVGSRKT IPGVRTYVAI DGGMSDNPRP ITYQSLYTCC
VADRPLAETD ETVNLVGKHC ESGDVLLKDL PLPSTTSGDV IAVFATGAYN ASMSSNYNRI
PRPAAVLVHD GAAELVQKRE QPDDLLRYDV LPQRFHKVR