Gene Syncc9902_1380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1380 
Symbol 
ID3742884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1340010 
End bp1341425 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content48% 
IMG OID637771564 
Productarginine decarboxylase 
Protein accessionYP_377388 
Protein GI78184953 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1982] Arginine/lysine/ornithine decarboxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.104521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCTTT TGCCCCTGTT AAAAAAACGG CTCGGCAGGA GCTTGTTTTT GCCGGCTCAT 
GGAAGAGGAC AGGCGCTACC GAAGGTCTTC AAACGTCTTT TAAGGCAAAG GGCTGGAGCA
TGGGACTTAC CGGAGTTGGC GGAGATTGGC GGGCCACTCG AACTCCATGG TGCAGTTGGA
GAAAGTCAAC GGGAATCAGC AGCCGCCATA GGGGCTGATC ACTGCTGGTA CGGCGTGAAT
GGGGCCACAG GATTACTTCA GGCAGCCCTG TTGGCAATCG CTCAGCCCGG CGATGCCGTT
CTCATGCCTC GCAACGTTCA TAGAAGCCTG ATTCAAGCCT GTGTACTCGG AGACATCAAA
CCAATTCTTT ATAACGTTCC GTACAGCAAT AAATATGGGC ATGCGACTCA ACCAGACTGT
GATTGGATGC AGTGCATTCT TAACGAGTTA CCCACAGATA AGAAACGAAT CAAAGCTGCA
GTTCTCATTC ACCCCACCTA TCAAGGCTAC GCCGAGGATC CAAGCAAAAC AATTCAACTT
TTGCAATCAC AAAATCTTGT TGTACTCGTA GACGAAGCCC ATGGAAGCTA TTTTGCAGCA
AAGGTGGATC CAGATCTACC GGCTTCAGCA CTACATTGTG GGGCAGATCT AGTCGTCCAT
TCACTGCATA AATCAGCGGC AGGAATCGCG CAAACGGCGG TCCTGTGGCA GAAGGGACAG
CGTGTAGATC CAGAACAAAT CAATCGATGC CTAGGCTGGC TGCAAACAAC AAGCCCAAGC
TCTCTACTTT TAGCGTCGTG TGAGTCAGCA ATACAAGAAT GGACGAACCC AAAGGGCATA
AACGAGTTAA AAAGACGAAT CAACGAGGGG CGCTTACTTG CGGAGAAGCT ACGTCAATCT
GGGATGCCAT TGATCACCAA TCAAGATCCA CTACGACTCA TCCTCCATAC TGGTTCCATC
GGACTGAATG GCTTAGAAGC TGACGAACAA TTCATGCAAA GGGGATTGAT TGCTGAACTT
CCAGAGCCCA GCACATTAAC GTTTTGCCTA GGTATGGCGA AACATGAAGG CCTTTATCGA
CACCTCAAAA ATGCGTGGAA AGACATTGAG TCAACAACAT TAGATAAAAC ACCTCAACCA
ACATTTTCAA ATCCACCCTT ACCATTAGTC CGGGAACCTG AGGTGAAACT CAGCACTGCA
TGGACAGCAG AAAATAGAAT AGTTTCAATT GAGAATGCTG AAGGGGAAAT TGCCAGCGAG
CTGGTTTGTC CTTACCCGCC GGGGATACCA CTTCTCATAC CAGGAGAGAA AATTGATCAT
GCAAGGATGA GATGGTTAAT AGAACAAAGC ATTGATTGGA AGAATGCAGT GCCTAACGAA
ATAAAGGTAA TGTTGAATGC TACAGGCAAT TCATAA
 
Protein sequence
MALLPLLKKR LGRSLFLPAH GRGQALPKVF KRLLRQRAGA WDLPELAEIG GPLELHGAVG 
ESQRESAAAI GADHCWYGVN GATGLLQAAL LAIAQPGDAV LMPRNVHRSL IQACVLGDIK
PILYNVPYSN KYGHATQPDC DWMQCILNEL PTDKKRIKAA VLIHPTYQGY AEDPSKTIQL
LQSQNLVVLV DEAHGSYFAA KVDPDLPASA LHCGADLVVH SLHKSAAGIA QTAVLWQKGQ
RVDPEQINRC LGWLQTTSPS SLLLASCESA IQEWTNPKGI NELKRRINEG RLLAEKLRQS
GMPLITNQDP LRLILHTGSI GLNGLEADEQ FMQRGLIAEL PEPSTLTFCL GMAKHEGLYR
HLKNAWKDIE STTLDKTPQP TFSNPPLPLV REPEVKLSTA WTAENRIVSI ENAEGEIASE
LVCPYPPGIP LLIPGEKIDH ARMRWLIEQS IDWKNAVPNE IKVMLNATGN S