Gene Syncc9902_1370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1370 
Symbol 
ID3742874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1329152 
End bp1330306 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content55% 
IMG OID637771554 
Producthypothetical protein 
Protein accessionYP_377378 
Protein GI78184943 
COG category[S] Function unknown 
COG ID[COG1649] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.837101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAACGGT TGCTCTGCGG CGTCCTTGCG GGGCTCACCT CTGTTGGAGT GTTTACGCTC 
AACGCCCAGT CGCAATCGCG CTTGGATCGG TTGTTGCGAA CCAAGACCAC GATGGGGGTC
TGGCTCACCA ATAGCCCAAG CCCTTTGTAT TACGACCGCC GTCGCATGGC GGTTGCGATG
GAAGAGCTGC AGCGGGCTGG ATTTACGCGA GTGATCCCTA ATGTTTGGAG TCGTGGAACC
ACATTTCACC GGAGTCGGTT TGCGCCGGTG GAACCACCCT TAGCCAAGGT TGGGCTTGAG
ATTGATCCGA TTTGTACGCT CGCCGCTGAA GGGCGAAAGC GCGGCATCAA GGTGATGCCT
TGGTTTGAAT ATGGCCTGAT GGAACCGGCC GATGCTCAGG TCGTGAAAGA TCACCCTGAC
TGGGTTTTGG CGAAAGCGAA TGGCGAACAC ACGATGACGA TGCACGGACG GCATCGCATG
GCTTGGTTGA ATCCAGCTCA CCCAGAGGTG AGGGAACGAT TTATTGGGTT GGTGGTGGAG
TTACTTCAGC GATGCTCCAT GGATGGCCTG CAATTGGATG ACCACTTCGC TTGGCCTGTG
GCGTTTGGCT ACGACAGCTA CACGTCGAAC TTGTATGAGG AGCAAACGGG AACGTTGCCT
CCCATCGATC ACACCAATCG CTACTGGATG CGTTGGAGAC GGCGGCAGCT CACCTCGCTT
TTACGGGATT TACGTGCCCG CCTGAAACAA GAACAATTGC CCCAACGGAT CAGTCTTTCC
CCCGGTCCAT TTCGACAGGC GTACAACATT TGGCTGCAGG ACTGGGAACT TTGGGCGATG
GGTGAGCTCA TCGATGAGCT TGTGGTGCAG AACTATGCCC ATTCAGTGAA GGGCTTTGCC
CGTGATCTGG ATCAGCCTGC GTTACGCAAA GCACGTGAGT GGCGGATCCC CACTCAGATC
GGGATTTTGG CTGGTTTTGG CCCACGGACG ACGGCAATCC CCGTTCTGCG AGAGAAAGTT
CGATTGGCTC GAGAACGTGG TCATGGCGTT GTTTTTTTCT ATTGGGAGGG CTTATGGGGC
ATGCATGTCC CACAGGGGGA TCGTCAACGT CGCTACGGTT TCTTCGACGA ATTAGGTGAA
TTCGAACAAC AATGA
 
Protein sequence
MQRLLCGVLA GLTSVGVFTL NAQSQSRLDR LLRTKTTMGV WLTNSPSPLY YDRRRMAVAM 
EELQRAGFTR VIPNVWSRGT TFHRSRFAPV EPPLAKVGLE IDPICTLAAE GRKRGIKVMP
WFEYGLMEPA DAQVVKDHPD WVLAKANGEH TMTMHGRHRM AWLNPAHPEV RERFIGLVVE
LLQRCSMDGL QLDDHFAWPV AFGYDSYTSN LYEEQTGTLP PIDHTNRYWM RWRRRQLTSL
LRDLRARLKQ EQLPQRISLS PGPFRQAYNI WLQDWELWAM GELIDELVVQ NYAHSVKGFA
RDLDQPALRK AREWRIPTQI GILAGFGPRT TAIPVLREKV RLARERGHGV VFFYWEGLWG
MHVPQGDRQR RYGFFDELGE FEQQ