| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_1334 |
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| Symbol | |
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| ID | 3743158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 1292062 |
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| End bp | 1293768 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637771517 |
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| Product | menaquinone biosynthesis protein |
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| Protein accession | YP_377342 |
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| Protein GI | 78184907 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
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| TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.24751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAGGGAT TGATCGAGCT TGGTTTGCGC CGTTTGGTGC TCTGTCCTGG GAGTCGTTCT
GGATCGTTAG CGACAGCAGC AGGTTTGCTG GCGTCGTCCG GGCAGCTCCA GCTCAACACT
GCCATTGATG AACGGTCGGC GGCGTTTCTG GCATTGGGTT TGGCCACCGC TGGTGGCTCT
GCCGTGGCAG TGGTGACCAC CTCGGGAACG GCGGTCGCCA ATCTGCTTCC CGCTGTGATT
GAAGCCGATC GGTCTTGTCA GCCGTTGCTC GTCATCACCG CCGATCGTCC GATCCGACTC
AAGGCGTGTG GCGCCAATCA AACGGTGAAT CAGGAGGATT TTTTGCGTCC CGCCTGTCGC
TGGTGTGGCA ATGGTGCCCC TGAGGGGTTG CATGCCATGG CCTCCCATGC CGTGCTTGAG
CTCGCGGCTC TGGCCTGGAG CCAGGCCCAC GGGGCTGATC AAGCGGCAGC GGGCCCCGTG
CATCTCAATC TTCCCGTGGA GGAACCGATC CATGCTCCGC TTCAGGAGCA CCAGCCCCTG
CTGGATGCCG TCTTAGCCAG CGACGAAGCA TCGCTTTTTC CCCTCCAGCC GTCGACGATC
CAATCCAATC GCGATGTCCC CCGATTGGAT CCATCGCGGC CGGGTGTCGT CATTGCTGGC
CCATGGCGTG GTCTGGCCCA GGATCTGTCC GCCCATCAGC AGGCCGTTCG CTCTTGGTTG
GTGTGCAGTG GATGGCCTCT TTTGGCCGAT CCCTTGTCTG CTCTGCCCGT CGAGCTGCCA
GGACGATTGC ACCATTGGGA CCTACAACTC GAGCAGCTCA TCAGCCCTGA GCCCTTGCAG
GTGTTGCGGC TGGGACCGTT GCCCGCGAGC CGACGTTTAG AGGTCTGGCT CAAGCGCAAC
GCAGGCGATC AAGTGCTGAT CACAGAGGGT GAGCCGCGCT ACATGGATCC CTTGGGGTTG
GCTACGCAGT GGAGCGGTGG ACTCGCGGCG TGGTGTTGTG CGCAGCCGTT GGATCAAGCT
TCGCGGCCAC TATCGGCAGA CCATTCGGCT TGGTTGCGGC GCGACCAGGC GTTGGGACTT
TGGCTGGAAG AACAGTTGGT GTCCGAGGGT CCGGTTTCTG AACCCGCCTT GGCGTTTCAA
CTGGCAGACC TGTTGCCGCC TGGCCTTCCG GTGATGCTTT CCGCCAGTTC TCCCGTGCGC
GATTGGCTCA CCTGGAGCGG CCGATCCGGC AGCGACCGCC GTTGTTTCAG CTTTCGCGGG
GCCTCCGGCA TCGATGGCAC CTTGTCGTTG GCCATGGGAC TCGCCCTCGA AACGGGTCCG
ATGCTGCTAG TGACGGGCGA TTTAGCCCTG CTTCACGACA GCAATGGTTG GCTACACGGC
CAATCGGATG GCCCGCCACT GGTGGTGCTG CTAATCGATA ACGGTGGCGG TGGCATCTTC
CAGCAACTCC CGATTGAACA AGCTTCACCG AAGCGGTTTG ATGCGTTGTT TGCCATGCCC
CAGCGGGTGA ATCCGATCGC CCTGGCGGCG GCCCATGGTG TACCAGGTCG CTCCATCGCG
GTGATCGACG ATCTGCCTGA AGCGCTCTCC TGGGCCTTGG CTCAGCAAGG TCCGGTGTTG
CTGCGGGTGT GCACGGATCG CCATGCTGAT GCTGCATTTC GCCGCAAGCT TCGTTCGGCT
GCCCAGAATG TTGAGCCTGG GGTTTAG
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| Protein sequence | MQGLIELGLR RLVLCPGSRS GSLATAAGLL ASSGQLQLNT AIDERSAAFL ALGLATAGGS
AVAVVTTSGT AVANLLPAVI EADRSCQPLL VITADRPIRL KACGANQTVN QEDFLRPACR
WCGNGAPEGL HAMASHAVLE LAALAWSQAH GADQAAAGPV HLNLPVEEPI HAPLQEHQPL
LDAVLASDEA SLFPLQPSTI QSNRDVPRLD PSRPGVVIAG PWRGLAQDLS AHQQAVRSWL
VCSGWPLLAD PLSALPVELP GRLHHWDLQL EQLISPEPLQ VLRLGPLPAS RRLEVWLKRN
AGDQVLITEG EPRYMDPLGL ATQWSGGLAA WCCAQPLDQA SRPLSADHSA WLRRDQALGL
WLEEQLVSEG PVSEPALAFQ LADLLPPGLP VMLSASSPVR DWLTWSGRSG SDRRCFSFRG
ASGIDGTLSL AMGLALETGP MLLVTGDLAL LHDSNGWLHG QSDGPPLVVL LIDNGGGGIF
QQLPIEQASP KRFDALFAMP QRVNPIALAA AHGVPGRSIA VIDDLPEALS WALAQQGPVL
LRVCTDRHAD AAFRRKLRSA AQNVEPGV
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