Gene Syncc9902_1285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_1285 
Symbol 
ID3742366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1244595 
End bp1245083 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content58% 
IMG OID637771467 
Producthypothetical protein 
Protein accessionYP_377293 
Protein GI78184858 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.967033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCGCC GACCGCTGGC TTTGTTAGCT GCATTGCTTC TTCTACTAAC GCCTCTCCTT 
TACGCCGCAG CGCCAGTACG CGCGGCGGTG GATGTTGCGA AGCAAGTGCT GATTGGTGCT
GATTACGCCA ACAAAGATCT CGTCGGGGCC ACCTTCAACC TCAGCAATCT TCGCGAAGCC
GATCTCTCCG GCTCCGATCT CCGTGGAGCC AGTTTGTACG GGGCCAAGCT CCAGGATGCC
GACCTCAGCG ACACCGACCT GCGTGAAGCC ACCTTGGATT CAGCGGTCAT GACCGGAACC
AACCTCAGCA ATGCAGTGAT GGAAGGTGCC TTTGCTTTCA ACACCCGTTT CAAAGATGTT
GTGATTACCG GGGCTGACTT CACCGATGTC CCCATGCGCC CTGATCAGCT GAAAAGTCTT
TGCAGCGTGG CTGACGGCAC TAACCCCGTT ACCGGCCGGA GCACCCGCGA AAGCCTTGGC
TGCAGCTGA
 
Protein sequence
MRRRPLALLA ALLLLLTPLL YAAAPVRAAV DVAKQVLIGA DYANKDLVGA TFNLSNLREA 
DLSGSDLRGA SLYGAKLQDA DLSDTDLREA TLDSAVMTGT NLSNAVMEGA FAFNTRFKDV
VITGADFTDV PMRPDQLKSL CSVADGTNPV TGRSTRESLG CS