Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_1247 |
Symbol | rpsB |
ID | 3743051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 1212146 |
End bp | 1212865 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637771427 |
Product | 30S ribosomal protein S2 |
Protein accession | YP_377255 |
Protein GI | 78184820 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0052] Ribosomal protein S2 |
TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0978856 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGTTG TCACTCTCTC CGAAATGATG GAGGCGGGTG CCCACTTTGG GCACCAAACC CGTCGTTGGA ACCCCAAGAT GTCGCGCTAC ATCTATTGCG CGCGCAATGG TGTCCACATC ATTGATTTGG TTAAAACCGC CGTATGCATG AACAATGCAT ACAAGTGGAC CCGCTCTGCA GCGCGTAGCG GCAAACGTTT TCTGTTCGTT GGTACCAAAA AGCAGGCCTC TGAGGTGGTT GCTTTGGAAG CTGCCCGTTG TGGCGCGGCC TATGTCAACC AGCGTTGGTT GGGCGGCATG CTCACCAACT GGACCACGAT GAAAGCGCGT ATCGATCGTC TGAAAGACCT CGAACGCATG GAATCCAGTG GTGCCATTGC GATGCGCCCT AAAAAAGAGG GAGCTGTTCT CCGTCGGGAA CTTGAGCGTC TTCAGAAATA CCTCGGTGGT CTGAAGACCA TGCGTCGTCT TCCTGACGTT GTTGTTTTGG TTGACCAGCG TCGGGAATCC AACGCCGTGC TCGAAGCCCG CAAACTGGAC ATCCCGTTGG TGTCGATGTT GGATACCAAT TGCGATCCCG ATCTCTGTGA GGTGCCGATC CCTTGCAACG ACGATGCAGT CCGATCTGTT CAACTCGTTC TTGGTCGCTT GGCTGATGCG ATCAATGAAG GCCGCCATGG CTCTAATGAG CAAAGAGGCG GAGACGATTA CGAGGGTTAA
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Protein sequence | MAVVTLSEMM EAGAHFGHQT RRWNPKMSRY IYCARNGVHI IDLVKTAVCM NNAYKWTRSA ARSGKRFLFV GTKKQASEVV ALEAARCGAA YVNQRWLGGM LTNWTTMKAR IDRLKDLERM ESSGAIAMRP KKEGAVLRRE LERLQKYLGG LKTMRRLPDV VVLVDQRRES NAVLEARKLD IPLVSMLDTN CDPDLCEVPI PCNDDAVRSV QLVLGRLADA INEGRHGSNE QRGGDDYEG
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